Detail information of GWHGAAEX014204/evm.TU.scaffold_57.116


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|563697372|ref|YP_008870122.1|9.00E-14soluble cytochrome b558 [candidate division WWE3 bacterium RAAC2_WWE3_1]
KOGKOG05371.00E-74Cytochrome b5
nrgi|743814068|ref|XP_010929918.1|4.93E-76PREDICTED: cytochrome b5-like [Elaeis guineensis]
Swissprottr|P49100|CYB5_ORYSJ3.00E-76Cytochrome b5
trEMBLtr|F2CW94|F2CW94_HORVD9.00E-76Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_59533.1}
TAIRAT2G327201.00E-74cytochrome B5 isoform B

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005548267464834319+
Transcript Sequence

Network for GWHGAAEX014204

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00173.27Cyt-b512835.00E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0020037Molecular Functionheme binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms345.650
SRR2545915Juvenile tuber261.080
SRP108465SRR5643513five period of Gastrodia elata491.190
SRR5643514five period of Gastrodia elata620.630
SRR5643515five period of Gastrodia elata572.730
SRR5643524five period of Gastrodia elata627.030
SRR5643525five period of Gastrodia elata455.350
SRR5643528five period of Gastrodia elata413.300
SRR5643658five period of Gastrodia elata418.050
SRR5643659five period of Gastrodia elata588.030
SRR5643660five period of Gastrodia elata568.220
SRR5643661five period of Gastrodia elata584.570
SRR5643662five period of Gastrodia elata633.140
SRR5643663five period of Gastrodia elata813.290
SRR5643664five period of Gastrodia elata792.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1268.120
SRR6049655Rhizomagastrodiae_C368-T10_good_1314.290
SRR6049656Rhizomagastrodiae_C368-T07_good_1333.630
SRR6049657Rhizomagastrodiae_C368-T07_good_1237.750
SRR6049658Rhizomagastrodiae_C368-T04_good_1228.310
SRR6049659Rhizomagastrodiae_C368-T04_good_1213.150
SRR6049660Rhizomagastrodiae_C368-T01_good_1229.760
SRR6049661Rhizomagastrodiae_C368-T04_good_1217.100
SRR6049662Rhizomagastrodiae_C368-T01_good_1316.490
SRR6049663Rhizomagastrodiae_C368-T01_good_1279.860
SRR6049664Rhizomagastrodiae_C368-T10_good_1407.290
SRR6049665Rhizomagastrodiae_C368-T10_good_1407.290
SRP279888GastroGastrodia elata tuber 651.56
JuvenJuvenile tuber311.09
Mother_GastroMother tuber of Gastrodia elata 345.36
Mother_JuvenMother tuber of Juvenile 312.92