Detail information of GWHGAAEX014208/evm.TU.scaffold_57.120


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG40682.00E-33Uncharacterized conserved protein
nrgi|672157851|ref|XP_008798647.1|1.79E-111PREDICTED: vacuolar protein sorting-associated protein 25-like [Phoenix dactylifera]
Swissprottr|Q8VZC9|VPS25_ARATH3.00E-104Vacuolar protein sorting-associated protein 25
trEMBLtr|M0SEZ6|M0SEZ6_MUSAM8.00E-112Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P15800_001}
TAIRHS141501552.00E-33Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005549813855009755+
Transcript Sequence

Network for GWHGAAEX014208

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05871.11ESCRT-II131453.50E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12189VPS25, EAP20 Endocytosis map04144

Gene Ontology

GO term OntologyName
GO:0071985Biological Processmultivesicular body sorting pathway
GO:0000814Cellular ComponentESCRT II complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms66.870
SRR2545915Juvenile tuber70.620
SRP108465SRR5643513five period of Gastrodia elata53.620
SRR5643514five period of Gastrodia elata50.050
SRR5643515five period of Gastrodia elata45.390
SRR5643524five period of Gastrodia elata47.780
SRR5643525five period of Gastrodia elata54.960
SRR5643528five period of Gastrodia elata53.450
SRR5643658five period of Gastrodia elata63.390
SRR5643659five period of Gastrodia elata35.880
SRR5643660five period of Gastrodia elata40.080
SRR5643661five period of Gastrodia elata37.010
SRR5643662five period of Gastrodia elata47.390
SRR5643663five period of Gastrodia elata45.380
SRR5643664five period of Gastrodia elata47.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.310
SRR6049655Rhizomagastrodiae_C368-T10_good_123.810
SRR6049656Rhizomagastrodiae_C368-T07_good_148.100
SRR6049657Rhizomagastrodiae_C368-T07_good_138.580
SRR6049658Rhizomagastrodiae_C368-T04_good_160.840
SRR6049659Rhizomagastrodiae_C368-T04_good_174.900
SRR6049660Rhizomagastrodiae_C368-T01_good_155.140
SRR6049661Rhizomagastrodiae_C368-T04_good_165.680
SRR6049662Rhizomagastrodiae_C368-T01_good_154.530
SRR6049663Rhizomagastrodiae_C368-T01_good_160.970
SRR6049664Rhizomagastrodiae_C368-T10_good_159.350
SRR6049665Rhizomagastrodiae_C368-T10_good_159.350
SRP279888GastroGastrodia elata tuber 54.45
JuvenJuvenile tuber52.34
Mother_GastroMother tuber of Gastrodia elata 53.85
Mother_JuvenMother tuber of Juvenile 55.50