Detail information of GWHGAAEX014212/evm.TU.scaffold_57.125


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428308285|ref|YP_007119190.1|4.00E-27methyltransferase-like protein [Crinalium epipsammum PCC 9333]
KOGKOG30454.00E-90Predicted RNA methylase involved in rRNA processing
nrgi|721665040|ref|XP_010235629.1|1.72E-103PREDICTED: ribosomal RNA-processing protein 8 isoform X1 [Brachypodium distachyon]
Swissprottr|Q84JC0|RRP8_ARATH3.00E-90Ribosomal RNA-processing protein 8
trEMBLtr|W5GYJ3|W5GYJ3_WHEAT1.00E-105Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_6DL_A621C37DA.1}
TAIRAT5G405304.00E-90S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005553211355348708+
Transcript Sequence

Network for GWHGAAEX014212

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05148.14Methyltransf_8722581.80E-68
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008168Molecular Functionmethyltransferase activity
GO:0005730Cellular Componentnucleolus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.030
SRR2545915Juvenile tuber17.040
SRP108465SRR5643513five period of Gastrodia elata19.750
SRR5643514five period of Gastrodia elata21.630
SRR5643515five period of Gastrodia elata18.040
SRR5643524five period of Gastrodia elata19.340
SRR5643525five period of Gastrodia elata16.280
SRR5643528five period of Gastrodia elata12.660
SRR5643658five period of Gastrodia elata16.000
SRR5643659five period of Gastrodia elata21.810
SRR5643660five period of Gastrodia elata23.300
SRR5643661five period of Gastrodia elata18.990
SRR5643662five period of Gastrodia elata19.500
SRR5643663five period of Gastrodia elata20.510
SRR5643664five period of Gastrodia elata22.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.010
SRR6049655Rhizomagastrodiae_C368-T10_good_115.620
SRR6049656Rhizomagastrodiae_C368-T07_good_116.010
SRR6049657Rhizomagastrodiae_C368-T07_good_115.930
SRR6049658Rhizomagastrodiae_C368-T04_good_113.300
SRR6049659Rhizomagastrodiae_C368-T04_good_116.870
SRR6049660Rhizomagastrodiae_C368-T01_good_114.580
SRR6049661Rhizomagastrodiae_C368-T04_good_115.070
SRR6049662Rhizomagastrodiae_C368-T01_good_114.130
SRR6049663Rhizomagastrodiae_C368-T01_good_116.750
SRR6049664Rhizomagastrodiae_C368-T10_good_119.310
SRR6049665Rhizomagastrodiae_C368-T10_good_119.310
SRP279888GastroGastrodia elata tuber 21.89
JuvenJuvenile tuber23.95
Mother_GastroMother tuber of Gastrodia elata 12.84
Mother_JuvenMother tuber of Juvenile 18.23