Gene detail

Detail information of GWHGAAEX014224/evm.TU.scaffold_58.12

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672192728\|ref\|XP_008775847.1\|	7.74E-77	PREDICTED: uncharacterized protein LOC103696099 [Phoenix dactylifera]
trEMBL	tr\|M5XYZ8\|M5XYZ8_PRUPE	9.00E-67	Uncharacterized protein {ECO:0000313\|EMBL:EMJ24480.1}
TAIR	AT3G22550	5.00E-43	Protein of unknown function (DUF581)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000054	415090	417341	-

Transcript Sequence
>GWHTAAEX014224 GAAACCGCTTTTTTTAAACTGCTTTTTCTTTATCAGAAGTAATGGCGGTTTTCAGAGAAACGAACAAATCCATCCCCCTCACTCACTGTATTCTCACTTTAAAGCCTCCCCATCTTCGTGGCTGCATCAGCTCCCTCCCCCTGCCCTCTTTGAGCACCTTGAGAGTCGGAACAAAAGCGAGCTCCTTTTTCTTCTTCGGAGAAGAAAGAAAGGAGCGATTTTTATCACCCAAACCGATTCCATCTTCTTGTTTCTGGATTTCAGGAACAAAATGATGAACTTTTTCTCATTGTTAAATATTTCTTATAATCCTTTTCCGTCCCTCTTAAAATAATCGGATCAAAGGAAGGCAACCACCATATCGTTTTTCTGAGATTTTGAGAGGATTTTATAGGATTTTCTCCTTTGGGATATTTTCATGTTTTCCAAAAAGTGAGAAAACAGAAAACTTTGAGCTTTTCAGTTCAATTTCCTGTCGTCGTTCTGAGCTTTTGAAAGGGAAGAACAGAGAAGATTGATTTTTTTTTCGTATACAGAGAGCAAACCATAAGAAAATAACTTCAGAATGTCTGGTAGCTCTTCCTTCCTCCCATCTCCCTCGGGGAAGCACGCAAATCCCCTCTCCTCTCTCTTTGCTTCTCCCAAGCTCTTCATGGGCTTCCCTTCAAAGGGCATCTCAGACTCCGAGGCTTCCATGAGCCCAACCTCCATTCTTGAGATCAAACCCTTTTCTCTCACTAATCCCTGCCACCACAAAAAAGCATTTTGGGGCATCAATGGAGACTCAACAGCCATTGGCCTCGGCATCATCGATTCCCTCGCTAAAGAAAAGCCTGAGAAGAAAAGCCTTAGCCAAAGCAGCAGGATGGTTCTATTTGGATCTCATCTCAAGATTCAGATCCCCTCAGCACAGCCCAATTCCATATCTCCATTTGAATCCCCTGTCGAATTCGTCATAAAGAACAAGAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCATTTACTTCAAGGGAAATGGAGCTTTCAGAAGATTACACATGTGTGATTTCTCATGGGCCAAATCCAAAGAAAACTCATATCTTTGATAATTGTATCTTGGAGAGCATTGGGGATGGATTTGTGGCTCAGAAGAAGGAGAGGAGGTGTTTGACTGAGGTGATGAGCTCTTGCCAGGCTTCAGGGGATTTCTTGAGCTTCTGCCATGCTTGCAGGAAGAGCCTTGCACCAGGAAAGGATATTTTCATGTACAGGGGTGAGCAAGCATTCTGCAGTCATGAATGCCGTCAGCAAGAGATGATTTCTGATGCTGAAAACAATGGGAGTTGCTTTGCAGAGCTTTAAGGTCCTTTCATGGAGGCAGCCTTATGTAGGAGAGGAATTTAGATAGTTTCTTTTTTATTTTTCTTTGGCAATATATATATATATATATATATCTATATATATGATTGGGTGGGTGATGAATTCCTACTTGGATTTTATGGGCTTTATATTAACAATATTGCGTCATTGTTATTGTACCCTTTATGTAAATTATTTTGGGTCATCTCATCCTTCGGCTTCAAAGAAATCTGTAATTTATCTTATTTGTGAATAGTGATGGCTCATTGATTGAGAATTCAAAGTCTCAGCTGCTAAATATTACCTTTAATTATTATCAATGGTCTCT

Network for GWHGAAEX014224

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04570.13	zf-FLZ	206	252	3.00E-22

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	79.690
SRP064423	SRR2545915	Juvenile tuber	68.710
SRP108465	SRR5643513	five period of Gastrodia elata	83.330
	SRR5643514	five period of Gastrodia elata	83.730
	SRR5643515	five period of Gastrodia elata	32.830
	SRR5643524	five period of Gastrodia elata	62.430
	SRR5643525	five period of Gastrodia elata	318.800
	SRR5643528	five period of Gastrodia elata	199.990
	SRR5643658	five period of Gastrodia elata	482.490
	SRR5643659	five period of Gastrodia elata	43.120
	SRR5643660	five period of Gastrodia elata	45.770
	SRR5643661	five period of Gastrodia elata	40.240
	SRR5643662	five period of Gastrodia elata	78.530
	SRR5643663	five period of Gastrodia elata	72.310
	SRR5643664	five period of Gastrodia elata	82.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	65.500
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	118.850
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	80.900
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	62.180
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	71.630
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	67.990
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	47.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	56.410
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	49.490
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	35.880
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	98.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	98.080
SRP279888	Gastro	Gastrodia elata tuber	91.89
	Juven	Juvenile tuber	140.34
	Mother_Gastro	Mother tuber of Gastrodia elata	45.00
	Mother_Juven	Mother tuber of Juvenile	32.71