Detail information of GWHGAAEX014257/evm.TU.scaffold_58.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743814052|ref|XP_010929914.1|5.33E-133PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105051271 [Elaeis guineensis]
trEMBLtr|F6GVM2|F6GVM2_VITVI1.00E-124Putative uncharacterized protein {ECO:0000313|EMBL:CCB43984.1}
TAIRAT3G264004.00E-85eukaryotic translation initiation factor 4B1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005448406274852006-
Transcript Sequence

Network for GWHGAAEX014257

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06273.10eIF-4B13871.40E-136
PF06273.10eIF-4B3854891.30E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003743Molecular Functiontranslation initiation factor activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.320
SRR2545915Juvenile tuber26.930
SRP108465SRR5643513five period of Gastrodia elata39.740
SRR5643514five period of Gastrodia elata32.160
SRR5643515five period of Gastrodia elata36.470
SRR5643524five period of Gastrodia elata31.570
SRR5643525five period of Gastrodia elata38.870
SRR5643528five period of Gastrodia elata34.580
SRR5643658five period of Gastrodia elata43.730
SRR5643659five period of Gastrodia elata43.720
SRR5643660five period of Gastrodia elata45.990
SRR5643661five period of Gastrodia elata45.500
SRR5643662five period of Gastrodia elata53.990
SRR5643663five period of Gastrodia elata41.940
SRR5643664five period of Gastrodia elata49.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_149.650
SRR6049655Rhizomagastrodiae_C368-T10_good_136.080
SRR6049656Rhizomagastrodiae_C368-T07_good_145.330
SRR6049657Rhizomagastrodiae_C368-T07_good_154.880
SRR6049658Rhizomagastrodiae_C368-T04_good_153.770
SRR6049659Rhizomagastrodiae_C368-T04_good_157.110
SRR6049660Rhizomagastrodiae_C368-T01_good_155.480
SRR6049661Rhizomagastrodiae_C368-T04_good_151.590
SRR6049662Rhizomagastrodiae_C368-T01_good_143.810
SRR6049663Rhizomagastrodiae_C368-T01_good_146.960
SRR6049664Rhizomagastrodiae_C368-T10_good_138.610
SRR6049665Rhizomagastrodiae_C368-T10_good_138.610
SRP279888GastroGastrodia elata tuber 43.19
JuvenJuvenile tuber82.49
Mother_GastroMother tuber of Gastrodia elata 47.67
Mother_JuvenMother tuber of Juvenile 81.05