Gene detail

Detail information of GWHGAAEX014261/evm.TU.scaffold_58.80

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672191892\|ref\|XP_008775622.1\|	1.38E-131	PREDICTED: NAC domain-containing protein 8-like [Phoenix dactylifera]
Swissprot	tr\|Q6NQK2\|NAC8_ARATH	2.00E-77	NAC domain-containing protein 8
trEMBL	tr\|A0A061EC79\|A0A061EC79_THECC	1.00E-120	NAC domain transcriptional regulator superfamily protein, putative {ECO:0000313\|EMBL:EOY02531.1}
TAIR	AT1G25580	2.00E-77	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000054	5466579	5473084	+

Transcript Sequence
>GWHTAAEX014261 CGATCTGACAGCTCCCCTCATATCTCGATCGGTTTGCCTCGACCAGCCGCGGTCTGGCGTACCGACGTGAACCGGTCCGGAATTGTACCAGCTTCCCGCCTCACTATAAATACAATCCGAAGTCAAGACGCGTTCTCTTCTCGCTTCTCCCCTACGCGCAATCAAATCCGGTTATGCTGATTATTGACTTTACATTCACTCTGCTCAGTTCTTCTCCTCCACTCTTCCCTTCCATCGTCCTCATGAAAGAATGGCTAGGTAGGCGTCGCTCCCAGAATCCTTAGCCATTTCCATAGACACCGAATGTACATCAGGATCTTATTGGGTAGTTCTTTATGAATATCATGGCTGCTTGTTGGTTTCACAGGGCATGGCTGACTAATTCTCGTGGAATTGCGAAAAGAGTGAAGAATGCCTCTTCTTGTTCGAATTTTCAGCTCAGCGATTTGGGAGCTAATCGGGAATGCCCTAGTTGTCAGTATGTTATTGACAATAGTGATGCATCTTTCGAAATGCCTGGCCTTCCTGCCGGTGTAAAGTTTGACCCCTCTGATGTAGAACTTTTGGAACATCTAGCAGGAAAAGTTGGGATTGGGGTAGCCAAATCCCATATGTTTATTGATGAATTCATCTCAACTCTGGATGGGGATGAAGGAATTTGCTATACACACCCTGAGAATCTCCCCGGTGTCAGGAAAGATGGAATCTGCACACATTTTTTTCATCGCTCGCTAAATGCATATGCCACTGGAAACAGGAAGCGTCGAAAGGTTGGAATTGGATGTAGCCAGACTGAAGAATGTGTAAGGTGGCATAAGACAGGTAAAACAAAACCTGTGTTAGAGAACGGCAGTCTAAAAGGCTGGAAGAAGATCATGGTCCTATATAAAGGGATTGGTAAGGGATGCAAGCCAGACAGAGCTAATTGGGTGATGCACCAGTATCATATTGGGATGGAAGAAGTAGAAAATGAAGGGGAATTGGTGGTATCAAAGATATTCTATCAGCAAACGAAGCAAATGGATCGCTTTGGGACCGACGCTGTGCAAAAAAAGTCTAAATTCTTAACCATTATAATTGAACCTCTGACTCCTATAACTATGTCGAATGAAATTTCAGATGTGGTTGAGGAACATGCACCTCTTCGCTTGAAATTTCAGAAGGAAGAAACTAAAGAAATTGAATTACCCGTGCCGGCATTACCTAATTTGAAGAATGAAGACTTGGGGTCTGCTCTGCAGGCTGATGAATCACAAGCCGTGGAGGAACAAATCTCCGAGCTGATTAATGAAGAGCATTTTTCTCACTTGGGAGAATCATCCCAGCCACCTGCCATGATTTGCAGCTCCAATGATCTGATTGATATAGATGCTGATTCTACTTTTGATTTCCTTAGCCTCGACGACTTAGATGTTGGCTTACCGCCGCTCGATCTTCTATCTGATTTGCAATTCAGTTCACAAGAGAGCATCATGAACTGGCTGGATTGGCTGTAAAATTTTGGCTCTGTCCATTTTCTTAATGTTTAAGGGATGGATGAACTCTGATATCCATCATTTTGCTGTAAAAGGTCAGGACCTTTCATGTGCAAGTCAGGATCAGGGAGAAGAACAATAGCTAGCATGATGAAGGGATCATAAATTAAGTTTCTACTATTTGTGGCCTTTAATTTTAGCGTATTTTATTTTATTTTGTTTAAAATTTGATTAATGAGATGTATAAATTTAAAACTCTAGATTGAATATTATGGATGAATTTTATGTGATTTTGAAATGAGATGAATGAATTATTTTTATTTCTTG

Network for GWHGAAEX014261

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02365.14	NAM	64	205	1.20E-19

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.880
SRP064423	SRR2545915	Juvenile tuber	3.190
SRP108465	SRR5643513	five period of Gastrodia elata	8.820
	SRR5643514	five period of Gastrodia elata	2.910
	SRR5643515	five period of Gastrodia elata	15.870
	SRR5643524	five period of Gastrodia elata	3.420
	SRR5643525	five period of Gastrodia elata	6.740
	SRR5643528	five period of Gastrodia elata	4.070
	SRR5643658	five period of Gastrodia elata	3.640
	SRR5643659	five period of Gastrodia elata	7.040
	SRR5643660	five period of Gastrodia elata	3.950
	SRR5643661	five period of Gastrodia elata	5.630
	SRR5643662	five period of Gastrodia elata	12.530
	SRR5643663	five period of Gastrodia elata	9.040
	SRR5643664	five period of Gastrodia elata	10.960
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.270
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.140
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.690
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.600
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.100
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.090
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.560
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.240
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.590
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.810
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.330
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.330
SRP279888	Gastro	Gastrodia elata tuber	3.91
	Juven	Juvenile tuber	0.68
	Mother_Gastro	Mother tuber of Gastrodia elata	4.64
	Mother_Juven	Mother tuber of Juvenile	1.71