Detail information of GWHGAAEX014266/evm.TU.scaffold_59.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34674.00E-66Histone H4
nrgi|702477272|ref|XP_010032258.1|4.26E-67PREDICTED: histone H4-like [Eucalyptus grandis]
Swissprottr|P0CG89|H4_SOYBN1.00E-66Histone H4
trEMBLtr|K7LZT4|K7LZT4_SOYBN3.00E-66Histone H4 {ECO:0000256|RuleBase:RU000528}
TAIRAT5G599704.00E-66Histone superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000068101216102871-
Transcript Sequence

Network for GWHGAAEX014266

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF15511.5CENP-T_C601203.70E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
GO:0005634Cellular Componentnucleus
GO:0000786Cellular Componentnucleosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.370
SRR2545915Juvenile tuber61.100
SRP108465SRR5643513five period of Gastrodia elata276.950
SRR5643514five period of Gastrodia elata409.840
SRR5643515five period of Gastrodia elata269.010
SRR5643524five period of Gastrodia elata344.750
SRR5643525five period of Gastrodia elata392.980
SRR5643528five period of Gastrodia elata207.740
SRR5643658five period of Gastrodia elata248.260
SRR5643659five period of Gastrodia elata100.670
SRR5643660five period of Gastrodia elata86.900
SRR5643661five period of Gastrodia elata101.430
SRR5643662five period of Gastrodia elata97.520
SRR5643663five period of Gastrodia elata93.350
SRR5643664five period of Gastrodia elata66.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1155.060
SRR6049655Rhizomagastrodiae_C368-T10_good_1319.040
SRR6049656Rhizomagastrodiae_C368-T07_good_1221.460
SRR6049657Rhizomagastrodiae_C368-T07_good_1150.660
SRR6049658Rhizomagastrodiae_C368-T04_good_1105.960
SRR6049659Rhizomagastrodiae_C368-T04_good_199.920
SRR6049660Rhizomagastrodiae_C368-T01_good_1153.040
SRR6049661Rhizomagastrodiae_C368-T04_good_1155.160
SRR6049662Rhizomagastrodiae_C368-T01_good_1234.580
SRR6049663Rhizomagastrodiae_C368-T01_good_1191.720
SRR6049664Rhizomagastrodiae_C368-T10_good_1353.590
SRR6049665Rhizomagastrodiae_C368-T10_good_1353.590
SRP279888GastroGastrodia elata tuber 53.78
JuvenJuvenile tuber53.08
Mother_GastroMother tuber of Gastrodia elata 304.92
Mother_JuvenMother tuber of Juvenile 51.03