Detail information of GWHGAAEX014272/evm.TU.scaffold_59.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32025.00E-94SNARE protein TLG1/Syntaxin 6
nrgi|672128316|ref|XP_008787642.1|1.33E-125PREDICTED: syntaxin-52-like [Phoenix dactylifera]
Swissprottr|Q94KK7|SYP52_ARATH1.00E-100Syntaxin-52
trEMBLtr|K3Y9T4|K3Y9T4_SETIT2.00E-118Uncharacterized protein {ECO:0000313|EnsemblPlants:Si010976m}
TAIRAT1G795905.00E-94syntaxin of plants 52

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000068288142306020+
Transcript Sequence

Network for GWHGAAEX014272

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05739.18SNARE1792284.40E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08503SYP5 SNARE interactions in vesicular transport map04130

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms51.000
SRR2545915Juvenile tuber37.960
SRP108465SRR5643513five period of Gastrodia elata27.230
SRR5643514five period of Gastrodia elata28.540
SRR5643515five period of Gastrodia elata25.080
SRR5643524five period of Gastrodia elata26.920
SRR5643525five period of Gastrodia elata64.650
SRR5643528five period of Gastrodia elata51.930
SRR5643658five period of Gastrodia elata57.990
SRR5643659five period of Gastrodia elata37.000
SRR5643660five period of Gastrodia elata42.330
SRR5643661five period of Gastrodia elata30.660
SRR5643662five period of Gastrodia elata35.840
SRR5643663five period of Gastrodia elata33.980
SRR5643664five period of Gastrodia elata40.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.600
SRR6049655Rhizomagastrodiae_C368-T10_good_127.880
SRR6049656Rhizomagastrodiae_C368-T07_good_123.000
SRR6049657Rhizomagastrodiae_C368-T07_good_135.950
SRR6049658Rhizomagastrodiae_C368-T04_good_135.920
SRR6049659Rhizomagastrodiae_C368-T04_good_140.360
SRR6049660Rhizomagastrodiae_C368-T01_good_127.420
SRR6049661Rhizomagastrodiae_C368-T04_good_127.350
SRR6049662Rhizomagastrodiae_C368-T01_good_123.230
SRR6049663Rhizomagastrodiae_C368-T01_good_124.910
SRR6049664Rhizomagastrodiae_C368-T10_good_131.010
SRR6049665Rhizomagastrodiae_C368-T10_good_131.010
SRP279888GastroGastrodia elata tuber 47.84
JuvenJuvenile tuber44.69
Mother_GastroMother tuber of Gastrodia elata 42.37
Mother_JuvenMother tuber of Juvenile 38.10