Detail information of GWHGAAEX014276/evm.TU.scaffold_59.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383762648|ref|YP_005441630.1|7.00E-133acetylornithine/succinyldiaminopimelate aminotransferase [Caldilinea aerophila DSM 14535 = NBRC 104270]
KOGKOG14010Acetylornithine aminotransferase
nrgi|743867391|ref|XP_010905303.1|0PREDICTED: acetylornithine aminotransferase, mitochondrial-like isoform X1 [Elaeis guineensis]
Swissprottr|O04866|ARGD_ALNGL0Acetylornithine aminotransferase, mitochondrial (Precursor)
trEMBLtr|M0TXF4|M0TXF4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P04450_001}
TAIRAT1G806000HOPW1-1-interacting 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000068409239414943+
Transcript Sequence

Network for GWHGAAEX014276

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00202.20Aminotran_3814581.50E-111
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00818E2.6.1.11, argD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220

Gene Ontology

GO term OntologyName
GO:0006525Biological Processarginine metabolic process
GO:0008483Molecular Functiontransaminase activity
GO:0003824Molecular Functioncatalytic activity
GO:0030170Molecular Functionpyridoxal phosphate binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.990
SRR2545915Juvenile tuber44.390
SRP108465SRR5643513five period of Gastrodia elata33.680
SRR5643514five period of Gastrodia elata29.510
SRR5643515five period of Gastrodia elata26.970
SRR5643524five period of Gastrodia elata25.660
SRR5643525five period of Gastrodia elata26.500
SRR5643528five period of Gastrodia elata23.940
SRR5643658five period of Gastrodia elata15.990
SRR5643659five period of Gastrodia elata62.400
SRR5643660five period of Gastrodia elata66.870
SRR5643661five period of Gastrodia elata58.470
SRR5643662five period of Gastrodia elata57.220
SRR5643663five period of Gastrodia elata57.410
SRR5643664five period of Gastrodia elata64.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_169.210
SRR6049655Rhizomagastrodiae_C368-T10_good_158.800
SRR6049656Rhizomagastrodiae_C368-T07_good_161.520
SRR6049657Rhizomagastrodiae_C368-T07_good_173.280
SRR6049658Rhizomagastrodiae_C368-T04_good_168.330
SRR6049659Rhizomagastrodiae_C368-T04_good_179.140
SRR6049660Rhizomagastrodiae_C368-T01_good_178.140
SRR6049661Rhizomagastrodiae_C368-T04_good_169.020
SRR6049662Rhizomagastrodiae_C368-T01_good_158.060
SRR6049663Rhizomagastrodiae_C368-T01_good_165.630
SRR6049664Rhizomagastrodiae_C368-T10_good_149.100
SRR6049665Rhizomagastrodiae_C368-T10_good_149.100
SRP279888GastroGastrodia elata tuber 105.21
JuvenJuvenile tuber83.71
Mother_GastroMother tuber of Gastrodia elata 21.90
Mother_JuvenMother tuber of Juvenile 37.95