Gene detail

Detail information of GWHGAAEX014279/evm.TU.scaffold_59.24

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672116000\|ref\|XP_008781150.1\|	PREDICTED: uncharacterized protein LOC103701003 [Phoenix dactylifera]
trEMBL	tr\|M0TPC5\|M0TPC5_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P10720_001}
TAIR	AT4G16170	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	503103	548683	+

Transcript Sequence
>GWHTAAEX014279 GTTTTGAATTTATAATTTTAGCAAATCTAATTTCAGTGATCGGGTCCTTCAAATGTCGGTGTTCCCTTCGTCTTTTCTGCTAGCCCTCAGTAGACGGAACCCTAGCCATTAAATTCTACTTTTATGCAGCATTGATGCCTACACAGCGACCCCTCATTAGCAAAGCATTAGCGAATCATTAGCGAAGCAGGCCTCCCATGGGTTTGATCGCTGACCTAGCCCTTCTTTTTATCTTACATCTCTTTGTCTCCACCGGGCAATCGGCTCCCCAACCCTTCCGGCGAGATCCCGGTCATCCTCACTGGCACCATAGTGCCTTCCACGATGTGCAGGAAGGCGTTCGATCTGATATCCGCCGAATGCTTCACACTCGGGCTGAGGTTCCATTTCAGGTCCCTCTTGAGATAAATGTTGTCCTTATTGGCTTCAATGGTGATGGAGCCTATAGATACTTATTGGATGCGCAGAGGCTGGATGGTTTCTTGAAAACCAGCTTCCCAACCCATCGGCCCTCTTGCTTCGAAACCAGAGAACCTATTGATATTGAGCACCATTTTGTATATAATACAATCCCTGTTGGCCAGCCAGAATTAATATCCCTTGAGAAAGTGCTTAAAGAAGCAATGGTCCCTGCTGGAACTGCTAGAGAGAGTGAATATGGAAGAGAGGTTCCTGTCTTTGAGATAGAAGCCACTGTAGTGGAGCCAATGTTCCAAAAACTGTACTCTTTTTTATTTGATGAAGAAAGCGATAGATATTCCGCTGAAGAAATGGACAGGCCTGTGCCTACTGCAATATTTATCACCAACTTTGATAAGATTAGAATGGATCCTAGGAATAACGAAACAGACCTTGAAAGTCTAATGTACAGAAGAATAGAGAAGCTTACTGATGAACAGTTGAAAAATCAAGAAGGTGGTTATATTTACCGTTATAGGTACAATGGTGGGGGTGCTTCTCAGGTTTGGTTGAGCTCTGGGAGATATGCAGTGATTGATTTATCCTCTGGCCCTTGTACATATGGAAAAATAGAAGCTGAAGAAGGGAGTGTGAGTTATAGAACATTGCCACGCTTGTCCAGTTTATTTTTCTCAAGAGTTTCAACCCCTGTCAATGTTGCTTCCACTAATGAAGTTTTGATGGGACGCCTTGGAGCTCTGGTTTCAACAACTATAGAGCATCTTATAGCGCCAGACATCAGATTTGAAACAATTGATTTGACGACAAGACTGCTGATACCTATTATAGTCTTGCAAAATCATAATAGATACAATCTTCTCCAAGCTGGCCACAATTACAGCATAGATGTTCAAGCAATTGAGCAAGAGGTAAAAAAGATGGTACATGCTGGACAGGAAGTAATTGTTTTCAGTGGATCTTATGCATTGCATCGCCATGAAAAGTTAGCGATTGCAGTTTCTAAAGCTATGCGAGGGCATTCTCTTCAGGAGACAAAGAAAGATGGACGGTTTCATGTTCATACTAGAACATATTTAGATGGAGCCATCCTTAAAGAGGAAATGGAGCGTTCTGCTGATATCCTTGCTGCTGGTTTACTGGAGGTTGCTGATCCTTCGCTCTCAAGTAAATTTTTCCTTCGTCAGCATTGGATGGATGAGTCTGACAAAATACAGGATTCTATTATCAAGCACAAGCCGCTGTGGGAGTCATACTATCCCAAACATAGCAAAACTAAAAAACAGAGTGGTCAAAAGAATCAAGGAAATGTTTTCAAGACTTATGGGACCAGAGTAGTTCCTGTATTTGTGCTGTCTATGGCTGCTGTCGACGCTAACCTTTTGATGGAAGATGAAAGTCTTGTGTGGACGAGCAAGGATGCGGTTATTATCCTTCAGCATGATAATGAGAAGATACCGTTAAGCTATGTATCTGAAACGACAAAGCAGTATGCCTATCCATCTATGGCGCAACGTCACATTCTGGCAGGATTAGCGTCCGCTGTTGGGGGCTTAAGTGCGCCTTATGAGAGGGTATCACATGTACACGAAAGACCCGTTCTTAATTGGCTTTGGGCTTCTGGCTGTCATCCATATGGGCCTTTCTCCAATTCTTCTAAAATTAGTCAAATGCTGCATGATGTTGCTTTGAGAAACTCTATATATGCAAATGTTGATGCTGCTCTTCGCAAAATACGGGATACTTCAGAAACTGTTCAGTCTTTTGCATCTGAGCATCTCAGAACTCCCCTTGGCGAGCCTGTGAAGGGGAAGAAGCAGAAGTCCGTGGCTGAGCTGTGGGTGGAGAAATTCTATAAAAAGGTTACAAATTTGCCGGAACCATTTCCTCACGAACTTGTTGAGCGCCTAGAACAATATTTGGATAAAATTGAGGAACAGTTGGTGGATCTATCTGCACTTCTGTATGATCACAGATTGGAAGACGCATACCAGAACAGTTCAGAAATATTCCAGAGCACAACATTTACTGATCACTATGTGAATCGTGTTCTTGCTGCTGAGAAGGACAAAATGAGGTGCTGCCGCATAGAGTACAAAACGCCCGCACGGTCTTCGCAGGTTTTCATTTATGGGGGCATTCTTCTTGCAGGCTTCATTGTGTATTCCTTAGTTATTTTCTTCTCGTCGCCCGTACGCTGATTAACTGATTATTGAAAGCCTTACAATTTACTTGTACTGGTATTGTATTGTATTTTTTTTTTTTTTTTATCAATATTGGAGGATTGAGTTTTGAGTCCTCAGTTGGGCACTGTAGCAGTCCTCTTTTTAAATTGTTTCATCGTGTATAACTATTTATGCATAGGAAATTGATTGCATGATAATAAAAATTTTATAAAATGCATATTTATCTTTATTTTTTTATTTACAAAAG

Network for GWHGAAEX014279

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	103.460
SRP064423	SRR2545915	Juvenile tuber	70.560
SRP108465	SRR5643513	five period of Gastrodia elata	41.990
	SRR5643514	five period of Gastrodia elata	37.970
	SRR5643515	five period of Gastrodia elata	40.090
	SRR5643524	five period of Gastrodia elata	37.550
	SRR5643525	five period of Gastrodia elata	34.530
	SRR5643528	five period of Gastrodia elata	42.860
	SRR5643658	five period of Gastrodia elata	28.640
	SRR5643659	five period of Gastrodia elata	61.750
	SRR5643660	five period of Gastrodia elata	62.510
	SRR5643661	five period of Gastrodia elata	53.050
	SRR5643662	five period of Gastrodia elata	51.890
	SRR5643663	five period of Gastrodia elata	54.300
	SRR5643664	five period of Gastrodia elata	52.360
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	58.640
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	58.660
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	54.330
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	61.870
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	68.790
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	78.600
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	66.710
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	67.880
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	59.220
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	62.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	51.240
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	51.240
SRP279888	Gastro	Gastrodia elata tuber	51.29
	Juven	Juvenile tuber	35.34
	Mother_Gastro	Mother tuber of Gastrodia elata	39.79
	Mother_Juven	Mother tuber of Juvenile	39.58