Detail information of GWHGAAEX014282/evm.TU.scaffold_59.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427737935|ref|YP_007057479.1|2.00E-2850S ribosomal protein L11 methylase [Rivularia sp. PCC 7116]
KOGKOG14996.00E-138Protein arginine N-methyltransferase PRMT1 and related enzymes
nrgi|700257875|gb|AIU50544.1|0protein arginine methyltransferase 6, partial [Yucca filamentosa]
Swissprottr|Q08A71|ANM6_ARATH2.00E-170Probable protein arginine N-methyltransferase 6
trEMBLtr|A0A097PR97|A0A097PR97_YUCFI0Protein arginine methyltransferase 6 {ECO:0000313|EMBL:AIU50544.1} (Fragment)
TAIRAT3G200206.00E-138protein arginine methyltransferase 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000068583187603122+
Transcript Sequence

Network for GWHGAAEX014282

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06325.12PrmA1021761.30E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006479Biological Processprotein methylation
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.810
SRR2545915Juvenile tuber20.830
SRP108465SRR5643513five period of Gastrodia elata9.460
SRR5643514five period of Gastrodia elata9.380
SRR5643515five period of Gastrodia elata7.860
SRR5643524five period of Gastrodia elata7.800
SRR5643525five period of Gastrodia elata5.790
SRR5643528five period of Gastrodia elata5.930
SRR5643658five period of Gastrodia elata7.310
SRR5643659five period of Gastrodia elata10.540
SRR5643660five period of Gastrodia elata11.910
SRR5643661five period of Gastrodia elata11.340
SRR5643662five period of Gastrodia elata13.160
SRR5643663five period of Gastrodia elata12.010
SRR5643664five period of Gastrodia elata11.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.180
SRR6049655Rhizomagastrodiae_C368-T10_good_112.290
SRR6049656Rhizomagastrodiae_C368-T07_good_110.770
SRR6049657Rhizomagastrodiae_C368-T07_good_112.150
SRR6049658Rhizomagastrodiae_C368-T04_good_19.300
SRR6049659Rhizomagastrodiae_C368-T04_good_110.760
SRR6049660Rhizomagastrodiae_C368-T01_good_111.440
SRR6049661Rhizomagastrodiae_C368-T04_good_110.800
SRR6049662Rhizomagastrodiae_C368-T01_good_110.140
SRR6049663Rhizomagastrodiae_C368-T01_good_19.850
SRR6049664Rhizomagastrodiae_C368-T10_good_110.400
SRR6049665Rhizomagastrodiae_C368-T10_good_110.400
SRP279888GastroGastrodia elata tuber 16.96
JuvenJuvenile tuber12.46
Mother_GastroMother tuber of Gastrodia elata 8.39
Mother_JuvenMother tuber of Juvenile 8.58