Gene detail

Detail information of GWHGAAEX014283/evm.TU.scaffold_59.29

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1337	8.00E-106	N-methyltransferase
nr	gi\|672165932\|ref\|XP_008802885.1\|	1.69E-139	PREDICTED: N-lysine methyltransferase setd6 [Phoenix dactylifera]
trEMBL	tr\|M0TVM0\|M0TVM0_MUSAM	1.00E-136	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P32680_001}
TAIR	AT3G56570	8.00E-106	SET domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	605635	615441	-

Transcript Sequence
>GWHTAAEX014283 TAGCCTGCCTTCTCACCCCCTTCATCTAAAGAAACCCTCCACCTCCGCTTCAGCATCTCTTGGCCCAGCACGGCTTGTTCCTCCTCCTCTGCTTCAGCATCACCCGGTCTTCCTTATCTCCTTTGCTACCCTCGCAAATGAGTGTCTGACAGCTAATGATATCGCCTTCGCCAACCGCCCTAGGTTCCCCTCAGGTCGCTTCACTTCATACGATTACACGAATCTCGCGACGACCAAGCCGAAGCGCTAAATCATGGCCGTCGATGCGCTCTAGTACACCTCCAAATGATACTTCGTGTGAATGTGGATTTCGGCCAATACACGTAAATCATTTTGCACAAAAGGATACCTCAAAATTTTACTACACTTTTTTTGTTACCAAATGCTTGTAATCATAAATAACATGTAATAATTTTAACTTGCATGTATGTTTTAGGATGCCAAACTGTACTTCAAATTAAATATTTATATAAAGAATTATAACTACTCTACATATGTGATCTTTTTATCGCAAGAGTGAGCTGGTGGGATACACCTTCAAGGGCATCAGGCTGCCCCGTCGCTCTCGTTCAGTGGCATCTATGAGCAGCAGGAGACTGAGGGCCTTCAAGAGATGGATGAAGTCACAGGGGATCGTATACAGCGATGCCCTAGAATTCGTCGATTCATTGGACGATGGCATCTCCGTTCGTGCGCTGTACGATCTCAAGGAAAGCGATCTCATCGCTACCATCCCTAAGCTGTCCTGCCTCACCGTCCGGACTACGGGGATTTCATCACTCATCGAGGTGGCTAGTCTTGGAGGCTTCCTAGGTCTGGCTGCAGCGCTTATGTATGAGAGGAGCCTCGGCGCGGCATCTCCATGGCATGGATACCTCCAGCTATTGCTTGATAGGGAGCCTGTTCCGATTGTTTGGACTTCTGAGGAGGTGGACAAGCTTCTGGTTGGGACCGAGCTTTACAAGGCAGACGGTAAAACAAGACAAGAAATTTCTTTGCGAGGATTGGAAAGAACACATTGAACCTCTTATTCAATCAGGAACTTTAGAAATAAACAAAGACAGTTTTGGCATTGAGAAGTACATTTCTGCGAAGAGTCTTATTGCTTCTAGATGCTTTGATATTGATGACTATCATGGCTCTGGTATGGTGCCGCTGGCTGATTTATTTAATCACAAGACTGGAGCCGAGAATGTTCATTTTACAATACCAGCTTCCTCTAGCTCAGATGATGAAGTTATTGGAGACATTTTTAATGTCTCTGATGATGAGAAGGATTCTGTGGAAAACTTGACCAATACATTAGTAAGTGGTACTTGCGAAGCTCTGGAAATGATTGTGGTGAAGGAGGTTGAGGCAGGTGCTGAGGTCTTCAACACTTATGGTTCTATGGGTAATGCTGCATTGCTTCACAGATATGGATTTACAGAGCCTGACAATCCTTTTAACATTGTTAACATCGATCTTGATCTAGTACTCAGTTGGTGCTCTTCCTCATTTTCGAACCGATATGGTCGAACACGGCTATCATTGTGGAGGAAGCTGAATTACTCAGGCTGCGCTAGCCAGGATTCTGAGTACTTTGAGATATCTTCTGATGGCAGACCTCAAATAGAGCTGCTGATACTCCTGCACATCATTTTCTTATCAGAAAACATATTTGAGAAACTTTACTTTGCAATAGATTCTCTAACTAAAGCTTGTGAAGCTGATAGGCTAATTAAGTTATTGGAGTTAAACCAAACAGACTATGAACACAAATCCGAGAAGGCATTGCTGACAAAAAATGTTTGTCATGCGCTTGTTTCCCTTGCTGACATTAGGGAGAGTTTGTATGGGTGCAGTTCTTTGAAGGAGGACATTAGCAGGCTCCATAATTGTTGCAGATTGAGGGAGAGCAAGTTGTACCATTCTTTAGTTTTGCGTGTGGATGAAAGAAAAATACTAGGTAAGGTTAGGACATATGCTTGGAAACACCTATGCTCTATGAAAAGATCGTGCGGAAGAAAAACATCAAGAAATTTCTGAGTAACCGGAAATTAATTTTTGCACAATTTTTTTTTATTTCAGCCATTGTGGCAGCAACTCTCAATCCTTCTACTTTATTTTTTCCAGGTTCGTCTAATAGATCTTATTATTTAGTTATTTTCATTTCACTGATGATACTTGTTGTTCATTAGATATTGTTTGTCATCCGAAGATCTAGTTACATGTTAGCATCGAAGGTTTTCTTTAGTATTGATAGTTTTGTATTTTTTTTTATAAGAGTTGTTAAGTGTTATTTTAACCTTTAGGAACTTTACTAATACACATGAAGTTGTTGAACTTTCGTTCTTCACTTTTTATTTTTTCATGGTGTGTGGCAACTGGCAAATGGAGATTCTTGTTACTTCAGAAAAGGTGGGTTAATTGTTCAATACAATTGGAATTCCTTTGTGTGCATAAGGGGTTATTAGGCTAAAGCCCTTGTCATTTATGTGGATAATTCATTAATCTTAAGATTTAGTGCATGAGTTATTGGGCTAAAGCCCTTGTCATTTATGTGAATAACCCATTAATCTTATGCTTTAATGCATAAGGAGTTCACTGGGGTCTGATGATTCTCCTAAGAGTCAAGTGGATTTGGCCTTGGTTTGGCTTGAGTTAGCCCTAAAACAAGTCATTTGTATCCTTTGGACTTTCTTTCCAAGGATGACGGACATGGTTAAGACAATGGAGTTGGTTAGGCTAGCTGGGTTTAACCTTGGCCATGGGATAGCAATTCA

Network for GWHGAAEX014283

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00856.27	SET	48	184	1.20E-05

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	SET

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0018026	Biological Process	peptidyl-lysine monomethylation
GO:0016279	Molecular Function	protein-lysine N-methyltransferase activity
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	15.210
SRP064423	SRR2545915	Juvenile tuber	18.990
SRP108465	SRR5643513	five period of Gastrodia elata	19.470
	SRR5643514	five period of Gastrodia elata	17.220
	SRR5643515	five period of Gastrodia elata	15.510
	SRR5643524	five period of Gastrodia elata	15.030
	SRR5643525	five period of Gastrodia elata	12.450
	SRR5643528	five period of Gastrodia elata	12.240
	SRR5643658	five period of Gastrodia elata	17.250
	SRR5643659	five period of Gastrodia elata	35.930
	SRR5643660	five period of Gastrodia elata	34.630
	SRR5643661	five period of Gastrodia elata	29.180
	SRR5643662	five period of Gastrodia elata	30.040
	SRR5643663	five period of Gastrodia elata	38.820
	SRR5643664	five period of Gastrodia elata	29.050
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	43.510
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.390
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	30.190
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	49.120
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	46.640
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	51.600
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	43.980
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	42.070
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	20.810
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	25.700
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.800
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.800
SRP279888	Gastro	Gastrodia elata tuber	44.29
	Juven	Juvenile tuber	50.65
	Mother_Gastro	Mother tuber of Gastrodia elata	8.95
	Mother_Juven	Mother tuber of Juvenile	26.86