Gene detail

Detail information of GWHGAAEX014286/evm.TU.scaffold_59.32

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743762897\|ref\|XP_010910439.1\|	7.50E-60	PREDICTED: uncharacterized protein LOC105036365 [Elaeis guineensis]
trEMBL	tr\|M0TK43\|M0TK43_MUSAM	8.00E-45	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P23570_001}
TAIR	AT1G24160	4.00E-12	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	642739	660742	-

Transcript Sequence
>GWHTAAEX014286 TCCGCCCACCTCTCTAAAATTTCCGGTCCCCAACGGCTGCTGAAGTGTTCAGCCAGTAGATGGAATAACGCAGGGGGCAAGTGCCCTTCCCCGTTGAGCCATATAGGTCGGGGAGCTGCAGATTTTTATTTTTGGTTATGAGAATCCTTCATTCCAACTTCTGACAATCTTCTTCGTTTTTCTCCCTGCAATTTTCAGAGCAAAAGTATGGCTTAAGGAAGTTGTCATGGATCACTAGGAAACTGATTCAGGCAAAAATGGCAAGTGACGTTCAACAAGCTTATTATGAATGGAAGCATGGGGAACTTTCTAAGCAAGAAGATTCTCCGGGGCCTTCTATTGCTCAAATGATAAATCACGGTTCAGTATCTTTTGGAAGATTTGCGTTCGAGTCATTGTCATGGGAGAAAAGATCTGTGTTCACTCACAATGAATGCCAGGATGAGCTTGAAAAGTTCAAATCTCCTGGTTTAGTGGCAAAAAAGAAGGCGTACTTTGAGGATTACTACAAAAAGATTCGTGTATTGAAGGCTATGCAGAACCAGCAAACTCAACTCTGTTTGGAATATGGCGCTGATGGCAGCATCCCCTGCCAAACTGGAGATGAAGATGCTGTACCATTGACATGTTCGAGTTCCAATGAATTAGCTGAAAGTATCAGTCAGGTTTCATCTGAAGAAATAAATTTCAAGCAGATATGTAATTTTGATCATGCGTTTGGGAGACCAGGACTAACTGAAGATGTTACACTAAAGAAAAATATTGAACCGCAGAAGAGTTGCTGTGAGGTCAAGAAAGAGGAAAATTATAATGATTCTGCTAGCATGCAAAATTCTTCCACGGAAATTTTGACACTTGGACTATCAACAGATTCTCAGGAGATCCAGCTGAATGAAAATCGTAACTTACAATGGACATTCAATAATGATAGTAACTTAAAGATGGAGCCTGATTTAACCCCAACATTATGTTCGACCGAGTCTGTAGTCTTAAATACTATAGAGGCAGATTTTGTGCCAGCTGAGAACACAGTACTGGACAATAATAAACCGACTGTTCATTCGCCTAAAGTTGATTGTGCATCAGTTTCGATACCAAAGAAACATGCTGCCTCTGTTAGCCTCTTTTCAAAATCATGCAACAATTCATTATCTAAACGGAACAAGGCATCAATGGGCTCTAGACATTTACAGAAAAAGATAGTTGACAAGGGAGATACTGGCATAACCTTAGGCAAGAAGACTTCTACCAATGTTAGAAACCACAATAAACATTCTTTTGTTGCTTCTCAGCAATCACCCTCTGAAGTACAAAATAAAGTTGCCATTCCAAGACCAGGCCCTCTCTCCAAGGAAAGAAAGGTAACAATGCCTACTAAAGCTAGGGAACATGTTCTAAGATCACAAATAAAAAATTCAGAAAGATCAGAATCAAGGAAAATTAATCCAAAGGGAAAATTAAAAGAACAGGGAAATTCAAGGGAGATGGCTACACAGAATATTATTAAAAATAGAGAATCACTAAGTAAAAGTTTAGGCCATGAAGAATTCCAAAGAAACCTGAACAGGTACGTTACTGCTCAAAGAAGAGATGCCAGTAATGAACTAAAAACAAGGTCTATCAATCTTTCTTCTAGAAATAATCAAAATCCTTATGGGGTTATAAGTTCATTAAATGGAGATAAAATAAAAAAGGAAAATCCTTTGACAATACGAAAGTACGAGGGTAAGGTCGCTAAAATCTCTACCACTCCAAAACAAAATGGAAACATCAAAGCGGATACTGTTCAGAAACCGATGGGCAGAGCAGAAAAGCACGAGATGCCATCCAAACAGAGCAAATCCCGCATTGGTGAGCTGCCATTAAATGGGAAAAAGTCCAGGAAGGACATTCCAAGATGGAGATAAAAACTGGTCATTTAAAATGGTAAGCTGATTTCCACAAGCACTATAATCTCATTACTTGTATCAAAAGAAGCACCCAACTTTGATTTTTGTCATCAATGGGAATGTGAGATTGTTAGATATGTAAATTTCATGAGTATTTTTTGGTCTATTTTGTTTTGAAAGATTCTTTGTTAATTAAATATGGAAGCAGTTTTTTTCATAACATAAAAAAAAGT

Network for GWHGAAEX014286

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	52.000
SRP064423	SRR2545915	Juvenile tuber	35.140
SRP108465	SRR5643513	five period of Gastrodia elata	51.750
	SRR5643514	five period of Gastrodia elata	43.190
	SRR5643515	five period of Gastrodia elata	48.500
	SRR5643524	five period of Gastrodia elata	53.990
	SRR5643525	five period of Gastrodia elata	2.650
	SRR5643528	five period of Gastrodia elata	1.380
	SRR5643658	five period of Gastrodia elata	0.760
	SRR5643659	five period of Gastrodia elata	9.360
	SRR5643660	five period of Gastrodia elata	11.130
	SRR5643661	five period of Gastrodia elata	6.960
	SRR5643662	five period of Gastrodia elata	7.890
	SRR5643663	five period of Gastrodia elata	5.400
	SRR5643664	five period of Gastrodia elata	6.400
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	23.830
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	28.130
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	16.570
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	23.770
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	14.320
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.770
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	11.920
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.320
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	19.380
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.160
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	35.190
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	35.190
SRP279888	Gastro	Gastrodia elata tuber	6.50
	Juven	Juvenile tuber	17.49
	Mother_Gastro	Mother tuber of Gastrodia elata	34.87
	Mother_Juven	Mother tuber of Juvenile	64.92