Gene detail

Detail information of GWHGAAEX014289/evm.TU.scaffold_59.35

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|37520523\|ref\|NP_923900.1\|	4.00E-18	esterase [Gloeobacter violaceus PCC 7421]
nr	gi\|743762416\|ref\|XP_010908040.1\|	0	PREDICTED: GDSL esterase/lipase At1g71691-like [Elaeis guineensis]
Swissprot	tr\|Q9SF78\|GDL29_ARATH	5.00E-163	GDSL esterase/lipase At1g71691 (Precursor)
trEMBL	tr\|A0A061FI45\|A0A061FI45_THECC	2.00E-179	Zinc finger protein, putative isoform 1 {ECO:0000313\|EMBL:EOY17020.1}
TAIR	AT1G71691	2.00E-162	GDSL-like Lipase/Acylhydrolase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	788789	790661	-

Transcript Sequence
>GWHTAAEX014289 AAGAAGTTAACTGCAGATCACATGCTTATTTAAATCGTCTGTAAATGAAAGTACAGTTTCACAAGTGAATAAATAATAATTACTATCCCAACCACTTCCACGTAATATATATATTATATGAATTAGAGAGATACCTATTGCATGAAAAATGAGGGGGTGGATGGCCGCATTTGCATTAGGGTTATGGTTGATCGGAAATTCGCCGGCGGCGGCGGGCGGCGAGAAGGAGATGGTTCCGGCCATGTTTATTTTCGGGGACTCTCTGATCGACAACGGCAACAACAATAATCTGCCGACTTTAGCGAAAGCTAATTATTTTCCCTACGGCATCGATTTCCCCGCGGGTCCCACCGGCAGGTTCTCCAACGGCTACACTATCGTCGACGAGATAGCGAGTCTTCTGGGCCTGCCGCTAATTCCGGCGCACTCAGTCGCCTCCGCCGAAGAACTCCTCCACGGCGTAAATTATGCCTCCGCTGCTGCCGGCATCCTCGACATCACCGGCCAAAATTTCCTGGGTCGCATCCCCTTCAACCAGCAGATAAAGAACTTCGAATCGACCCTAGATCAGATGACGGACGCTCTGGGAGCTGACGACGTGGCCGCAGCCATAGCCGATTGCATCTTCTTCGTCGGAATGGGCAGCAACGACTACCTGAACAACTATCTCTTACCCAACTACGGCACTCGGAACCTGTACAACCCCGCGCAATACTCCGATCTCCTGATCCAGCATTATACCCAGCAGCTCACAAGACTGTACAATCTGGGAGGAAGGAAGTTCGTGCTCTCAGGGGTCGGATCCTTGGGCTGCATTCCCAGCATTCTGGCTCAGACCATGGACTCCAAATGCTCCCACCAAATCGACACCAATCTCATCTCTCCCTTCAACTCCAAGCTCAAGATTATGGTCAAAACCCTAAACAAAAATCTCCCGGCTGCAAAATTCACCTACATTGAGAGCTACGGCATGATCATGGACATTATCAACAACCCTAAGAATTACGGATTCAGTGTGATCGACAGTGGGTGCTGTGGAATCGGGAGAAACAGGGGGCAGATCACTTGCCTTCCGTTCCAGACTCCGTGCCCTAATCGGGACGACTACGTGTTCTGGGACGCCTTTCACCCGACGGCGAAGGTCAACAGCATCATGGCGCGCAAGGCGTTCGACGGAGAATCCGATGTCATTTCTCCCATTAACATACGCCAGCTTGCGAATCTGAGGCTTCGTCAGCCCGACAATTCGTCCCTGGATTGATCCGTGAGGGACGATTGGCTTTCACTCGAATAATGAGGAATCAGTGATCTGTATCAAAGAGATATTATTGTTCTTGCTTGCTTCCGATTTTTAGGGTTGCTGTATTGATTGTTTCGTTTTGTCGGTTCATTATGATCAAGTGTCTGATTATTTCTGAATATGGCGTGTTCAAAAATAACTGGAAATAAATGTTTAGTCGTAGCATAGTTATTTTAATGTTGACTTTTTTTTTTTACTTGAGCCTCAGCAAAAATTGTATTGCACAAATCAATGGG

Network for GWHGAAEX014289

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00657.21	Lipase_GDSL	33	339	4.90E-13

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.560
SRP064423	SRR2545915	Juvenile tuber	4.750
SRP108465	SRR5643513	five period of Gastrodia elata	3.940
	SRR5643514	five period of Gastrodia elata	3.300
	SRR5643515	five period of Gastrodia elata	2.830
	SRR5643524	five period of Gastrodia elata	2.740
	SRR5643525	five period of Gastrodia elata	18.190
	SRR5643528	five period of Gastrodia elata	17.320
	SRR5643658	five period of Gastrodia elata	22.680
	SRR5643659	five period of Gastrodia elata	2.920
	SRR5643660	five period of Gastrodia elata	1.900
	SRR5643661	five period of Gastrodia elata	3.820
	SRR5643662	five period of Gastrodia elata	2.180
	SRR5643663	five period of Gastrodia elata	2.070
	SRR5643664	five period of Gastrodia elata	2.470
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.040
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.610
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.990
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.890
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.500
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.480
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.400
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.980
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.280
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.480
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.570
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.570
SRP279888	Gastro	Gastrodia elata tuber	3.32
	Juven	Juvenile tuber	2.97
	Mother_Gastro	Mother tuber of Gastrodia elata	4.98
	Mother_Juven	Mother tuber of Juvenile	2.58