Gene detail

Detail information of GWHGAAEX014292/evm.TU.scaffold_59.38

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|15966499\|ref\|NP_386852.1\|	2.00E-19	glycosyl transferase (sulfolipid biosynthesis) protein [Sinorhizobium meliloti 1021]
KOG	KOG1950	0	Glycosyl transferase, family 8 - glycogenin
nr	gi\|672158496\|ref\|XP_008798993.1\|	0	PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 isoform X2 [Phoenix dactylifera]
Swissprot	tr\|Q8W4A7\|GUX3_ARATH	0	Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3
trEMBL	tr\|J3L6F2\|J3L6F2_ORYBR	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:OB01G48080.1}
TAIR	AT1G77130	0	plant glycogenin-like starch initiation protein 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	889628	899787	+

Transcript Sequence
>GWHTAAEX014292 TGCGTCTGACGAAATCGGCGAGGCTGAGCGAAGGCGTAGCACCGGCGCTGCGAGGCAGAGCTACGACGGCGAGGCGGAGCTGCGTCGGCCGAACATCAAACAGTGGCATTTAGCTGCGGCCAGGCTCGTTCTATGCTTCGTGCATCACCGCGACAGAATCAGGTATTCTTATACCGACTGACGGGGTGCTCTTTTCTTGGGTGACATTGTGCAGAGAGTCACGAGAGGACTTGTGGCGGCATTTCCTAGTCCTCCTGAGGCCATGCATAGGTTCGCTGAAAATCTCGATGATTCAAGCAAAAAAAGGAACCTTAGAGGCCAAAAGTTCAATGGTATGAGCAGCAAGTTCGTAGCACCATTGCATGAGAGAAGGTTCTGCTGCAAGCTCCGTTCACTGAAGCCCATCCTGTTGATAATTATATGCGGTACATTTTTAACATTCATCTTTGCTCCGGTGACTCACAATGAGCGCTCCCCACATTCGTCAAGGTCCAGATTGGTTGATGTGGGCTGGAAGATGATGTGGGAAAGGGCTGCCGCTGATTCCAGATACCCATCTGATCTGAATATCAACTGGACCCAAGTCTCTAGGGTCATCAAGAAGCTGAATGGCAGGAGGAGAGAGCTGAGGGTCGGCCTCCTGAATTTCAACATCACCGAAATCAACTCGTGGCAGCAACTGCTGCCGCGGGCTGAGCTGCACACCCCACAACTGAGTTGCGCCAGGGCCAACCTCACTTGGGATGACCTGTACCCTGAGTGGATCGACGAAGAGGCAGAATTCGGGGTTCCTTCCTGTCCGGATCTCCCCGATCCGGCGCTGGCGGCATTGTCGGCATTCGATCTCATTGCCGCCAAGCTCCCCTGCAACAGAACCCTCAAAAATTGGTCGAGAGATGTTGCTCGGTTGCACCTGCAGCTTGCCGCTGCCAGGCTTGCGACACGATCCGGCCATGGCAGCCAGCTCCCGGCGCACGTTCTGCTTCTTACCGACTGCTTCCCCATTCCGAATCTCTTCTCCTGCAAGAATCGGGTTGCTCGAGAAGGAAATGCTTGGCTCTATAACCCCGACCCTATCGATCTTAAAGAGAGCCTCCGGCTTCCTGTTGGCTCCTGCAAACTTTCGGTTCCACTGAAGTCAGGGAGAGGCCGCAGTTCGTCGGAAGAATCAGGAGGACGACGGCAACAGGAAGCCTACGCCACGATACTCCACTCGGCACATGTTTACGTGTGCGGGGCTATCGTAGCAGCACAGAGCATTCGCCTGGCCGGATCCGCGAGGGATCTGGTAATCCTCGTGGATGAAACAATCAGCAGGCACCATCGGGATGGGCTGGAGGAAGCCGGGTGGAAGGTGAGGACGATCGAGAGGATCCGAAACCCCAAGGCTGAGCGGGACGCATACAATGAGTGGAATTACAGCAAGTTCCGGCTGTGGCAGTTGACCGACTACGACAAGATCATCTTCATCGACGCCGACCTCCTTATCTTGCGGAACATCGATTTTCTCTTCACGGCGCCAGAGATAGCCGCAATCGGGAACAATGGGACGCTGTTCAACTCCGGGGTGATGGTGGTGGAGCCATCCAACTGCACGTTCGAGATGCTGATGGAGCACGTCAGCGAGATTGAATCGTACAACGGAGGGGACCAGGGGTACCTGAACGAGATCTTCACGTGGTGGCACCGGATCCCGAAGCGGACAAACTTCCTGAAGCACTTCTGGGAGGGGGACGAGGAGGCCATCAGGCGGGAGAAGGTGCAGCTGTTCGGGGCGAGCCCGCCGGAGCTGTATGTTCTGCACTACTTGGGGCTGAAGCCATGGCTATGCTTCCGGGACTACGACTGCAACTGGAATGTCGACATCCTGCAGGAATTCGCCAGCGACGCGGCGCACGAGACATGGTGGAGGGTGCATGACACCATGCCGGAGAGCCTGCAGAAGCACTGCCTGCTGAGGTCGAAGCAGAAGGCGGCACTGGAATGGGACAGGAGGCAGGCAGAGAAGGCGAAGTACTCTGATGGCCACTGGAAGCGTAACATAACTGATAAGAGGCTTCACATCTGCTTCGAGGAGTTTTGCTTCTGGGAGAGCATGCTCTGGCATTGGGGAGAGACCAATTCGACCACTCCCAACAATGCTGCTCCATAGCATTTCTTTTCTTATAGAAGAACAACTCTTTCTCTTTCACCTTACATATATAAATAGAGGGAGAGAGAGACAGAGTTTAAAGTGATACTCTAATTCTTTTAAGGCACAATTGGGTAGTAATAAAGCTTAGGCTTTTCTTAATTAGCATATTGTTTGTGACATACCATACAAGCTTTGTTTTTTCCCTTTTTTCTGTTTAGAATAAATGATTACTAATACTATGTATATACATCTTGATTAGTATTTTGTTGAGGAGCACTAGCAAGTTTTATAGTTTTGAATTGATAATGATGTGTTGGTTATTAATTGGCTATTCAGAATATGCTTTTGTTGAATTGATGATCATATAATATGTATTTTTATAAAGTTGATCATTGCCCAAAAAAGTACATAGCTGTTCAAAGCTCATTTTGAAGGCATTCGATATGATGATTGAAGCCAAAATTAGTGTTGCCTGCTAGTGAACTATACATTTCAAAATTTAAGTTTGGTAAAAACCCTGCTAAATACCAGAATAGTTGAATTCCATTTGATGAAGACACT

Network for GWHGAAEX014292

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01501.19	Glyco_transf_8	316	522	3.90E-11

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT8
Carbohydrate-Active enzymes Family	GT8

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016757	Molecular Function	transferase activity, transferring glycosyl groups

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	15.280
SRP064423	SRR2545915	Juvenile tuber	12.940
SRP108465	SRR5643513	five period of Gastrodia elata	29.870
	SRR5643514	five period of Gastrodia elata	23.340
	SRR5643515	five period of Gastrodia elata	31.980
	SRR5643524	five period of Gastrodia elata	27.300
	SRR5643525	five period of Gastrodia elata	47.950
	SRR5643528	five period of Gastrodia elata	48.030
	SRR5643658	five period of Gastrodia elata	47.810
	SRR5643659	five period of Gastrodia elata	42.380
	SRR5643660	five period of Gastrodia elata	44.280
	SRR5643661	five period of Gastrodia elata	55.570
	SRR5643662	five period of Gastrodia elata	45.680
	SRR5643663	five period of Gastrodia elata	50.020
	SRR5643664	five period of Gastrodia elata	48.040
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	20.690
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	21.230
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.900
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	20.440
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	16.530
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	16.730
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.920
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	15.510
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	21.620
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	21.820
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	24.140
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	24.140
SRP279888	Gastro	Gastrodia elata tuber	49.02
	Juven	Juvenile tuber	29.95
	Mother_Gastro	Mother tuber of Gastrodia elata	50.88
	Mother_Juven	Mother tuber of Juvenile	32.90