Detail information of GWHGAAEX014298/evm.TU.scaffold_59.45
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|698545463|ref|XP_009767393.1| | 1.86E-143 | PREDICTED: peroxidase 47 [Nicotiana sylvestris] |
| Swissprot | tr|Q9SZB9|PER47_ARATH | 2.00E-124 | Peroxidase 47 (Precursor) |
| trEMBL | tr|A0A068V3Z9|A0A068V3Z9_COFCA | 6.00E-142 | Coffea canephora |
| TAIR | AT4G33420 | 1.00E-123 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000068 | 1018972 | 1020917 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014298
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 40 | 280 | 1.90E-71 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004601 | Molecular Function | peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.480 |
| SRR2545915 | Juvenile tuber | 8.800 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 19.960 |
| SRR5643514 | five period of Gastrodia elata | 47.330 | |
| SRR5643515 | five period of Gastrodia elata | 18.220 | |
| SRR5643524 | five period of Gastrodia elata | 22.510 | |
| SRR5643525 | five period of Gastrodia elata | 37.940 | |
| SRR5643528 | five period of Gastrodia elata | 13.320 | |
| SRR5643658 | five period of Gastrodia elata | 26.230 | |
| SRR5643659 | five period of Gastrodia elata | 20.020 | |
| SRR5643660 | five period of Gastrodia elata | 8.110 | |
| SRR5643661 | five period of Gastrodia elata | 15.720 | |
| SRR5643662 | five period of Gastrodia elata | 5.370 | |
| SRR5643663 | five period of Gastrodia elata | 9.130 | |
| SRR5643664 | five period of Gastrodia elata | 4.150 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 33.380 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 55.520 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 49.090 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 23.390 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.740 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 10.230 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 25.890 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 19.200 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 88.340 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 45.950 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 80.640 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 80.640 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.12 |
| Juven | Juvenile tuber | 22.65 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.56 | |
| Mother_Juven | Mother tuber of Juvenile | 4.80 |