Gene detail

Detail information of GWHGAAEX014301/evm.TU.scaffold_59.48

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743876256\|ref\|XP_010907544.1\|	PREDICTED: LOW QUALITY PROTEIN: MLO-like protein 1 [Elaeis guineensis]
Swissprot	tr\|O49621\|MLO1_ARATH	MLO-like protein 1
trEMBL	tr\|M0TK49\|M0TK49_MUSAM	MLO-like protein {ECO:0000256\|RuleBase:RU280816}
TAIR	AT4G02600	Seven transmembrane MLO family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	1075451	1088155	-

Transcript Sequence
>GWHTAAEX014301 ACAAAACATACCATACCCATCGGCGTCTTTCTGCCTCTTCGTTTCAATGCTCTTCTTTGGTATCTTTCATTCCATACCGCCATTGAACTGACTGACTGACTGAGAGAGAGAGAGGGAAAGAGAGTCAGAGCTTAAGGCAACATGGGGAAGGAAGGAGCTGAAGGGGAGTTAAAGCTAGAGTTCACTCCGACATGGATCGTCGCGGGAGTTTGCTCTATCATCGTCTTCATCTCCCTCCTCGTCGAGCGCCTTATTCATTACCTCGGCAAGATTCTGAAGAGAAAGAATCAGAAGCCCTTGTTCGAGGCACTTCAGAAAGTTAAAGAAGAGCTGATGCTCATGGGCTTCATATCCCTGCTATTAACCGTTTTCCAGGCTACGATCGTAAGGATCTGTATCTCCAGGGAGTGGTCGTACCATTTACTACCTTGTAAAAAGGATTCTTCTACTGAATCAGCTAGCCAGACGGCGGGGAAGCGTCGCCTCCTTTCTTCACAAGAGTCTTACTGCGACGCCAAGTATGAAGTTCAGCTGCTATCAGTTGAGGCGTTGCACCAGCTACATATCTTTATTTTTGTTCTTGCGATCACTCATGTGGTTTTTTCTGTGCTTACTGTGGTTTTGGCTGGGTTAAAGATGCGTAAATGGAAGTATTGGGAGGATTCCATAAAAAAAAACGAATCAAGCAGTGTTCAAAGAACAGTTGCTCTTGTGCATCAATTTGAATTCATCAGGGATCATTTTAAGGGTATTGGCAAAGATTCAATAGTTTTGGGTTGGCTGCATTCTTTTGGTAAGCAGTTTTATGGATCTGTGACGAAGTCAGACTACACCACAATGAGGCTTGGTTTTATCATGACTCATTGCGGGAGCAATCCAAAATTTGGTTTTCACAAGTATATGGTTCGGGCACTTGAAGCTGATTTCAAGAAAGTTGTCGGAATAAGCTGGTACCTTTGGATGTTTGTGGTGGCCTTTCTGCTTCTGAATGTTGCTGGTTGGCACACCTATTTTTGGATAGCATTCGTTCCTTTAGTTCTTCTCCTTGCTGTGGGAACAAAACTGGAGCATATTATAAGCCAGTTGGCCTATGATGTTGCCGAAAAACATTCAGCTATAGAAGGAGATTTAGTAGTAAAGCCTTCTGATGACCACTTTTGGTTCCGCCGTCCTAAGATTGTTCTCTATTTGATTCACTTCATCCTATTTCAGAATGCCTTTGAGATCTCTTTTTTTTTCTGGATTATGACAACTTACGGTTTTGATTCCTGCATCATGGGAAAAATGGGGTATATTATCCCTAGACTTGTGATAGGGTTAATCATTCAAATACTATGCTGCTATAGTACTCTACCGCTTTATGCCATTGTGACCCAGATGGGAAGCTCCTTCAAGAAGGCCATATTTGAGGAACATGTGCAGCAAAGTCTGATAGGTTGGGCACACAAGGTAAGACGTAAGGCCCAGAAAGGCAGCGAAGCATCATCCAGGGCAGGCAGCATAGCATTGAAAGAGCAGATTTCGAGGGGAGCTCCTTTGCAGAAACTTGAGGATGATGATGATTTGCCTGATGGTCAGATTGAATCTCAAACTAAATCTTCTACTCCATTGAACTCTGGTCCAAAGTCAGTATAATTTTTTTTCTATAAGGTAGATATTGTTTTTCAGTTTAGTTGATGACTGTATCATTCTGCAAAATGTTTCTGCAAAAGGTGGGAAAGCATTACTAGCAAGTAATGCTGATAGAAAGATGTACTGAACGCTTTTGGGTTCAGTGGCATATTCAATGTTAAAAGCAATGCCATAATATAGGATTCGTATACTTGGAAAGTGTGTAAATCAATAAAGATAAAGATCAAAGATTGTTAAACATCGCCAGTTCTTAACTTTCACAAACAAGTAAATATAATTTAGATC

Network for GWHGAAEX014301

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03094.14	Mlo	11	451	4.80E-185

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006952	Biological Process	defense response
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.160
SRP064423	SRR2545915	Juvenile tuber	4.060
SRP108465	SRR5643513	five period of Gastrodia elata	6.780
	SRR5643514	five period of Gastrodia elata	7.650
	SRR5643515	five period of Gastrodia elata	6.470
	SRR5643524	five period of Gastrodia elata	7.750
	SRR5643525	five period of Gastrodia elata	4.800
	SRR5643528	five period of Gastrodia elata	2.000
	SRR5643658	five period of Gastrodia elata	2.570
	SRR5643659	five period of Gastrodia elata	2.400
	SRR5643660	five period of Gastrodia elata	1.950
	SRR5643661	five period of Gastrodia elata	4.090
	SRR5643662	five period of Gastrodia elata	2.970
	SRR5643663	five period of Gastrodia elata	2.340
	SRR5643664	five period of Gastrodia elata	3.420
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.900
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.090
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.230
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.500
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.130
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.350
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.450
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.340
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.960
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.590
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.590
SRP279888	Gastro	Gastrodia elata tuber	4.96
	Juven	Juvenile tuber	7.70
	Mother_Gastro	Mother tuber of Gastrodia elata	1.36
	Mother_Juven	Mother tuber of Juvenile	2.91