Detail information of GWHGAAEX014306/evm.TU.scaffold_59.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10752.00E-43FOG: Reverse transcriptase
nrgi|695074453|ref|XP_009384429.1|8.77E-95PREDICTED: uncharacterized protein LOC103971981 [Musa acuminata subsp. malaccensis]
trEMBLtr|W5HQD9|W5HQD9_WHEAT7.00E-97Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_7BL_BCE465D13.2}
TAIRAT5G040502.00E-43RNA-directed DNA polymerase (reverse transcriptase)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006811825551183220-
Transcript Sequence

Network for GWHGAAEX014306

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01348.20Intron_maturas2161107.70E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006397Biological ProcessmRNA processing

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.440
SRR2545915Juvenile tuber1.300
SRP108465SRR5643513five period of Gastrodia elata1.420
SRR5643514five period of Gastrodia elata1.310
SRR5643515five period of Gastrodia elata0.730
SRR5643524five period of Gastrodia elata1.160
SRR5643525five period of Gastrodia elata1.630
SRR5643528five period of Gastrodia elata1.120
SRR5643658five period of Gastrodia elata1.450
SRR5643659five period of Gastrodia elata1.540
SRR5643660five period of Gastrodia elata2.110
SRR5643661five period of Gastrodia elata1.990
SRR5643662five period of Gastrodia elata0.850
SRR5643663five period of Gastrodia elata1.830
SRR5643664five period of Gastrodia elata1.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.200
SRR6049655Rhizomagastrodiae_C368-T10_good_10.690
SRR6049656Rhizomagastrodiae_C368-T07_good_11.000
SRR6049657Rhizomagastrodiae_C368-T07_good_11.250
SRR6049658Rhizomagastrodiae_C368-T04_good_11.150
SRR6049659Rhizomagastrodiae_C368-T04_good_11.350
SRR6049660Rhizomagastrodiae_C368-T01_good_11.880
SRR6049661Rhizomagastrodiae_C368-T04_good_10.460
SRR6049662Rhizomagastrodiae_C368-T01_good_11.740
SRR6049663Rhizomagastrodiae_C368-T01_good_11.030
SRR6049664Rhizomagastrodiae_C368-T10_good_11.200
SRR6049665Rhizomagastrodiae_C368-T10_good_11.200
SRP279888GastroGastrodia elata tuber 2.18
JuvenJuvenile tuber1.25
Mother_GastroMother tuber of Gastrodia elata 5.11
Mother_JuvenMother tuber of Juvenile 1.49