Detail information of GWHGAAEX014309/evm.TU.scaffold_59.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521460431|ref|YP_008147087.1|7.00E-18hypothetical protein SCE1572_03120 [Sorangium cellulosum So0157-2]
KOGKOG06710LAMMER dual specificity kinases
nrgi|743805879|ref|XP_010927537.1|0PREDICTED: serine/threonine-protein kinase AFC2-like [Elaeis guineensis]
Swissprottr|P51567|AFC2_ARATH0Serine/threonine-protein kinase AFC2
trEMBLtr|A0A067K460|A0A067K460_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP31011.1}
TAIRAT4G247400FUS3-complementing gene 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006812061741211128+
Transcript Sequence

Network for GWHGAAEX014309

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1004212.50E-51
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_CLK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.940
SRR2545915Juvenile tuber33.410
SRP108465SRR5643513five period of Gastrodia elata23.750
SRR5643514five period of Gastrodia elata20.650
SRR5643515five period of Gastrodia elata20.770
SRR5643524five period of Gastrodia elata22.140
SRR5643525five period of Gastrodia elata40.860
SRR5643528five period of Gastrodia elata42.460
SRR5643658five period of Gastrodia elata28.890
SRR5643659five period of Gastrodia elata30.430
SRR5643660five period of Gastrodia elata31.750
SRR5643661five period of Gastrodia elata28.940
SRR5643662five period of Gastrodia elata38.700
SRR5643663five period of Gastrodia elata34.590
SRR5643664five period of Gastrodia elata35.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.440
SRR6049655Rhizomagastrodiae_C368-T10_good_124.530
SRR6049656Rhizomagastrodiae_C368-T07_good_127.580
SRR6049657Rhizomagastrodiae_C368-T07_good_129.930
SRR6049658Rhizomagastrodiae_C368-T04_good_138.500
SRR6049659Rhizomagastrodiae_C368-T04_good_134.120
SRR6049660Rhizomagastrodiae_C368-T01_good_125.800
SRR6049661Rhizomagastrodiae_C368-T04_good_131.190
SRR6049662Rhizomagastrodiae_C368-T01_good_126.090
SRR6049663Rhizomagastrodiae_C368-T01_good_130.120
SRR6049664Rhizomagastrodiae_C368-T10_good_130.670
SRR6049665Rhizomagastrodiae_C368-T10_good_130.670
SRP279888GastroGastrodia elata tuber 44.80
JuvenJuvenile tuber28.00
Mother_GastroMother tuber of Gastrodia elata 58.31
Mother_JuvenMother tuber of Juvenile 65.43