Detail information of GWHGAAEX014313/evm.TU.scaffold_59.64


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672190198|ref|XP_008775178.1|9.87E-137PREDICTED: expansin-A8 [Phoenix dactylifera]
Swissprottr|Q9XHX0|EXPA8_ORYSJ1.00E-119Expansin-A8 (Precursor)
trEMBLtr|M0RUM6|M0RUM6_MUSAM1.00E-132Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P22960_001}
TAIRAT4G016302.00E-118expansin A17

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006812318321232680-
Transcript Sequence

Network for GWHGAAEX014313

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03330.17DPBB_1411281.90E-24
PF01357.20Pollen_allerg_11392165.50E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009664Biological Processplant-type cell wall organization
GO:0005576Cellular Componentextracellular region

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.680
SRR2545915Juvenile tuber22.580
SRP108465SRR5643513five period of Gastrodia elata8.870
SRR5643514five period of Gastrodia elata40.320
SRR5643515five period of Gastrodia elata13.490
SRR5643524five period of Gastrodia elata52.250
SRR5643525five period of Gastrodia elata3.790
SRR5643528five period of Gastrodia elata16.500
SRR5643658five period of Gastrodia elata2.370
SRR5643659five period of Gastrodia elata1.560
SRR5643660five period of Gastrodia elata0.530
SRR5643661five period of Gastrodia elata1.870
SRR5643662five period of Gastrodia elata2.260
SRR5643663five period of Gastrodia elata2.510
SRR5643664five period of Gastrodia elata3.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.390
SRR6049655Rhizomagastrodiae_C368-T10_good_110.390
SRR6049656Rhizomagastrodiae_C368-T07_good_111.730
SRR6049657Rhizomagastrodiae_C368-T07_good_16.110
SRR6049658Rhizomagastrodiae_C368-T04_good_12.390
SRR6049659Rhizomagastrodiae_C368-T04_good_10.630
SRR6049660Rhizomagastrodiae_C368-T01_good_14.200
SRR6049661Rhizomagastrodiae_C368-T04_good_16.300
SRR6049662Rhizomagastrodiae_C368-T01_good_17.210
SRR6049663Rhizomagastrodiae_C368-T01_good_12.960
SRR6049664Rhizomagastrodiae_C368-T10_good_120.830
SRR6049665Rhizomagastrodiae_C368-T10_good_120.830
SRP279888GastroGastrodia elata tuber 0.72
JuvenJuvenile tuber0.75
Mother_GastroMother tuber of Gastrodia elata 7.89
Mother_JuvenMother tuber of Juvenile 3.46