Gene detail

Detail information of GWHGAAEX014317/evm.TU.scaffold_59.69

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0048	3.00E-83	Transcription factor, Myb superfamily
nr	gi\|693302214\|gb\|AIS35926.1\|	1.61E-138	MYB transcription factor 9 [Phalaenopsis equestris]
Swissprot	tr\|Q8LPH6\|MYB86_ARATH	1.00E-79	Transcription factor MYB86
trEMBL	tr\|A0A096ZX69\|A0A096ZX69_PHAEQ	6.00E-139	MYB transcription factor 9 {ECO:0000313\|EMBL:AIS35926.1}
TAIR	AT4G01680	3.00E-83	myb domain protein 55

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	1347911	1350440	+

Transcript Sequence
>GWHTAAEX014317 GTAAATAAGAACCTTCATTGATAGATAAATAAACCACAAAAGCTTATTTTGAGAGAAAACTGGTCCCCATGTCCTGACCCATTTTAAATTAAAATTGAGCACATTGTTAAGATCATTCTATGCCTTCCAGGTTCCTCCATTAAAAAAAAATATCAGAGGGTAATGCCCCACCATTCCTGTAACATACATTAATTCAGAAGAGGGTGATTAGACAAATGCAGCTAATATGATAAATCCCCTCCTCCCCTCCTCTTCTTCAAAGCCCGAGAGGAAGGAAAGAAGCTCAGCTCAAATCACACCCACTTGATTTTAACCCCTTCCTTCGCCTTTTAAGCACATTCCTCTTCTCCTCATTCCGCCCCTCCTCCTCCTTTTCCCCCAATCTCCATAAAGGCATTGAGAGGAATGGGAAGGCACTCATGTTGCCACAAGCAGAAGCTAAGGAAAGGCTTATGGTCTCCCGAAGAGGATGAGAAGCTGCTTAAGCACATAACCAAGTACGGCCATGGCTGCTGGAGCTCTGTCCCCAAATTGGCAGGGCTTCAGAGGTGCGGAAAGAGCTGCAGGCTGCGGTGGATAAACTACCTGAGGCCTGATCTCAAGAGAGGCACATTTTCACAGCAGGAAGAGAACCTCATAATTGAGCTCCATTCCGTTCTGGGGAACAGGTGGTCTCAGATCGCAGCCCAATTGCCGGGGAGAACCGACAATGAGATCAAGAATCTTTGGAACTCCTGCATCAAGAAAAAGCTGAGGCAGAGAGGCATTGATCCCAGCACCCACAAGTCCCTCTCCGACGCCCAAACTCCAGAAGCAGCAGCCATCAAGCAGACAGCGCCTCAGCCTCTCATACAATCCTCGTGCTTTTCCCTCCCCCAGCTTAACTATGCCAACAGCAGCAGCAGCTGCTTGCCTCTGAACCCAAATCCGTTTCTCTGGCTCAATCACAACTGCAGGGCGTTTGATTTGAATCCGGAATTGAGTTCTGTGGCAGGGCAGTCAATCGAGATGAAGTCTCCACCCGATCTGTCTTCAAGCAGCAGCTCCTTCTTCGACGGCAGCGGCTTGCTGTCATGGCCAGATATTGCCATGGAGAAAGAGAACCAAATTGGGCTGCAGGGTGACCCTGAAGACCTCAAATGGTCAGAGTACCTTCAGGGGAACTTCCCTGTCTCTTCAGCTCTCCATAGCCAAAGCCAGCCATTGTTCGCAGGGGGAGACACCCATTCAGATATCGACAGTTTGGGTCTTTGGCATCAGAACCAGCTGCCGCAGCACCAGGCTTCAGATTTATATGGTAAGGAATTTCAGAGGATTTCCACTCTGTTTGGACAGATATAACCCGGTTTCAAAGTGTTCCCGATTCATTCATGTAAGTGTGTGTGAGAGTGTATCATATGATTTTTCTCTTGTATATAGGGCTGACGAAAAGGAAAGCAACTCCTCTTATCTGTTGTTCTGATGATGTTTATGATTTGAGCAGTGCTTGTTATATCATATCCGTCCTCTGCGCTTGTAGCAGAAAGAAGCTTGTTTTATTTTAATATCAATGCAATTAGTAAACATATATCTGCTTTTTGGTGCTGAAATCCTTCAAATTCTTTGCCTCTTATTTTTATTTTTCTATCATTCGGCATTCACAATGCTGCTTCAGGATTACGCAGGCAGTCAGCAATGAGTTCCTATGAAGGCTACTGCACACTATATACTGATTATATACCTTTTCAGGGGGTTCTTATTACTATGACAGCTACTTGGATTCTCTCTTCTGTCTCTCCTCCCTGCCAGAAGAAGAGAAAATGACTGAAAGTAAAATAAGATGTCTTTACTTCGACTATTAGTAACAAGAAAGAGACCCCCGAGAAATGAAAAGGCCAACTTTTTCCCGCAGGCACTATCTTGTGACCCACTCTGCTCTATAAAGAAAGGAGGGAATAGAAAAACTTGCATTTAAAGGTAAAAGAAATTTGACAAGCTGTCTTGTGCTTTGCGGCTTTAAGATGTGTGTTCGAAGCTGATGAAGGGGCCATCGCTTTCTTTTGTGGGATCGTCTCTTTAAGGAAAATAATGGCAAGAAAAGCTTAAATGAAGTGGATGCCCCTTCAATTTTACTTGCTCGGAAAAGATGTTTTAGGACTCAACCAAAGGATTAATTAAAGGTGGGGATGATGCATTCATGATCAAACTAATTATCAGCATAAAAGCTCAAGATTTCTATTTCTTAAAGTCCAATCACTGCTACTTTTATTCTATTTTGTTAATGCACTGAGCTTTATTTTACTCTTTACATGCTTAATGATCTCCTTCAGTCTGAATTTTCCGTTGGGATGCTTGTCTTAAGTGAAGTCGGTTGCTAACTATTCCATATCCC

Network for GWHGAAEX014317

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.30	Myb_DNA-binding	14	61	1.60E-15
PF00249.30	Myb_DNA-binding	67	110	7.00E-13

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	MYB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.810
SRP064423	SRR2545915	Juvenile tuber	49.540
SRP108465	SRR5643513	five period of Gastrodia elata	17.240
	SRR5643514	five period of Gastrodia elata	28.020
	SRR5643515	five period of Gastrodia elata	28.410
	SRR5643524	five period of Gastrodia elata	24.190
	SRR5643525	five period of Gastrodia elata	8.740
	SRR5643528	five period of Gastrodia elata	5.850
	SRR5643658	five period of Gastrodia elata	11.820
	SRR5643659	five period of Gastrodia elata	35.940
	SRR5643660	five period of Gastrodia elata	37.610
	SRR5643661	five period of Gastrodia elata	41.750
	SRR5643662	five period of Gastrodia elata	30.040
	SRR5643663	five period of Gastrodia elata	55.980
	SRR5643664	five period of Gastrodia elata	49.520
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	19.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.530
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	27.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.390
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.620
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.830
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.080
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	15.520
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	21.580
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	25.830
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	26.280
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	26.280
SRP279888	Gastro	Gastrodia elata tuber	47.57
	Juven	Juvenile tuber	19.83
	Mother_Gastro	Mother tuber of Gastrodia elata	0.04
	Mother_Juven	Mother tuber of Juvenile	2.25