Detail information of GWHGAAEX014331/evm.TU.scaffold_59.85


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|170290521|ref|YP_001737337.1|2.00E-17small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8]
KOGKOG00771.00E-96Vesicle coat complex COPII, GTPase subunit SAR1
nrgi|695002625|ref|XP_009381133.1|7.74E-98PREDICTED: GTP-binding protein SAR1A-like [Musa acuminata subsp. malaccensis]
Swissprottr|O04834|SAR1A_ARATH3.00E-97GTP-binding protein SAR1A
trEMBLtr|M0S4B7|M0S4B7_MUSAM3.00E-98Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P01760_001}
TAIRAT4G020801.00E-96secretion-associated RAS super family 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006815260661529234-
Transcript Sequence

Network for GWHGAAEX014331

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00025.20Arf81923.60E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07953SAR1 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName
GO:0006886Biological Processintracellular protein transport
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.710
SRR2545915Juvenile tuber31.190
SRP108465SRR5643513five period of Gastrodia elata25.130
SRR5643514five period of Gastrodia elata24.600
SRR5643515five period of Gastrodia elata19.020
SRR5643524five period of Gastrodia elata20.640
SRR5643525five period of Gastrodia elata25.980
SRR5643528five period of Gastrodia elata22.180
SRR5643658five period of Gastrodia elata18.380
SRR5643659five period of Gastrodia elata20.940
SRR5643660five period of Gastrodia elata23.400
SRR5643661five period of Gastrodia elata22.620
SRR5643662five period of Gastrodia elata22.660
SRR5643663five period of Gastrodia elata23.430
SRR5643664five period of Gastrodia elata34.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.760
SRR6049655Rhizomagastrodiae_C368-T10_good_132.190
SRR6049656Rhizomagastrodiae_C368-T07_good_121.250
SRR6049657Rhizomagastrodiae_C368-T07_good_123.710
SRR6049658Rhizomagastrodiae_C368-T04_good_121.980
SRR6049659Rhizomagastrodiae_C368-T04_good_117.940
SRR6049660Rhizomagastrodiae_C368-T01_good_121.410
SRR6049661Rhizomagastrodiae_C368-T04_good_118.230
SRR6049662Rhizomagastrodiae_C368-T01_good_113.870
SRR6049663Rhizomagastrodiae_C368-T01_good_114.360
SRR6049664Rhizomagastrodiae_C368-T10_good_121.290
SRR6049665Rhizomagastrodiae_C368-T10_good_121.290
SRP279888GastroGastrodia elata tuber 26.56
JuvenJuvenile tuber52.14
Mother_GastroMother tuber of Gastrodia elata 23.68
Mother_JuvenMother tuber of Juvenile 35.59