Detail information of GWHGAAEX014332/evm.TU.scaffold_59.86


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|721672738|ref|XP_003579174.2|1.74E-11PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Brachypodium distachyon]
Swissprottr|Q9M345|LRK42_ARATH2.00E-08L-type lectin-domain containing receptor kinase IV.2 (Precursor)
trEMBLtr|I1IGM9|I1IGM9_BRADI6.00E-12Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI4G02327.1}
TAIRAT3G538106.00E-08Concanavalin A-like lectin protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006815294391529648+
Transcript Sequence

Network for GWHGAAEX014332

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr10514.90E-06
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_L-LEC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.180
SRR2545915Juvenile tuber18.530
SRP108465SRR5643513five period of Gastrodia elata57.160
SRR5643514five period of Gastrodia elata12.680
SRR5643515five period of Gastrodia elata23.910
SRR5643524five period of Gastrodia elata30.300
SRR5643525five period of Gastrodia elata128.900
SRR5643528five period of Gastrodia elata29.620
SRR5643658five period of Gastrodia elata24.420
SRR5643659five period of Gastrodia elata14.580
SRR5643660five period of Gastrodia elata6.440
SRR5643661five period of Gastrodia elata34.430
SRR5643662five period of Gastrodia elata15.540
SRR5643663five period of Gastrodia elata26.710
SRR5643664five period of Gastrodia elata35.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_163.800
SRR6049655Rhizomagastrodiae_C368-T10_good_121.110
SRR6049656Rhizomagastrodiae_C368-T07_good_118.450
SRR6049657Rhizomagastrodiae_C368-T07_good_110.900
SRR6049658Rhizomagastrodiae_C368-T04_good_121.000
SRR6049659Rhizomagastrodiae_C368-T04_good_138.530
SRR6049660Rhizomagastrodiae_C368-T01_good_136.400
SRR6049661Rhizomagastrodiae_C368-T04_good_112.670
SRR6049662Rhizomagastrodiae_C368-T01_good_119.300
SRR6049663Rhizomagastrodiae_C368-T01_good_161.690
SRR6049664Rhizomagastrodiae_C368-T10_good_164.200
SRR6049665Rhizomagastrodiae_C368-T10_good_164.200
SRP279888GastroGastrodia elata tuber 85.72
JuvenJuvenile tuber119.14
Mother_GastroMother tuber of Gastrodia elata 53.19
Mother_JuvenMother tuber of Juvenile 83.87