Detail information of GWHGAAEX014348/evm.TU.scaffold_59.102


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434394022|ref|YP_007128969.1|1.00E-28Aquaporin Z [Gloeocapsa sp. PCC 7428]
KOGKOG02233.00E-166Aquaporin (major intrinsic protein family)
nrgi|695022916|ref|XP_009398603.1|7.84E-179PREDICTED: probable aquaporin PIP2-2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9ATM4|PIP27_MAIZE1.00E-176Aquaporin PIP2-7
trEMBLtr|A0A067G0Y5|A0A067G0Y5_CITSI1.00E-177Uncharacterized protein {ECO:0000313|EMBL:KDO73274.1}
TAIRAT2G371703.00E-166plasma membrane intrinsic protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006819201821923545-
Transcript Sequence

Network for GWHGAAEX014348

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00230.19MIP362722.20E-80
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015267Molecular Functionchannel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.120
SRR2545915Juvenile tuber170.330
SRP108465SRR5643513five period of Gastrodia elata401.940
SRR5643514five period of Gastrodia elata556.970
SRR5643515five period of Gastrodia elata343.450
SRR5643524five period of Gastrodia elata428.240
SRR5643525five period of Gastrodia elata1143.120
SRR5643528five period of Gastrodia elata641.870
SRR5643658five period of Gastrodia elata1490.610
SRR5643659five period of Gastrodia elata214.260
SRR5643660five period of Gastrodia elata164.580
SRR5643661five period of Gastrodia elata190.180
SRR5643662five period of Gastrodia elata212.770
SRR5643663five period of Gastrodia elata227.410
SRR5643664five period of Gastrodia elata171.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1362.050
SRR6049655Rhizomagastrodiae_C368-T10_good_1461.010
SRR6049656Rhizomagastrodiae_C368-T07_good_1501.490
SRR6049657Rhizomagastrodiae_C368-T07_good_1343.710
SRR6049658Rhizomagastrodiae_C368-T04_good_1272.980
SRR6049659Rhizomagastrodiae_C368-T04_good_1215.870
SRR6049660Rhizomagastrodiae_C368-T01_good_1360.120
SRR6049661Rhizomagastrodiae_C368-T04_good_1390.950
SRR6049662Rhizomagastrodiae_C368-T01_good_1315.710
SRR6049663Rhizomagastrodiae_C368-T01_good_1236.020
SRR6049664Rhizomagastrodiae_C368-T10_good_1414.830
SRR6049665Rhizomagastrodiae_C368-T10_good_1414.830
SRP279888GastroGastrodia elata tuber 296.01
JuvenJuvenile tuber339.50
Mother_GastroMother tuber of Gastrodia elata 30.85
Mother_JuvenMother tuber of Juvenile 73.52