Gene detail

Detail information of GWHGAAEX014359/evm.TU.scaffold_59.114

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743780192\|ref\|XP_010920448.1\|	0	PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X3 [Elaeis guineensis]
Swissprot	tr\|Q8VZF6\|EDR2L_ARATH	5.00E-58	Protein ENHANCED DISEASE RESISTANCE 2-like
trEMBL	tr\|Q9AV46\|Q9AV46_ORYSJ	0	Putative uncharacterized protein OSJNBa0093B11.3 {ECO:0000313\|EMBL:AAK21344.1}
TAIR	AT3G54800	0	Pleckstrin homology (PH) and lipid-binding START domains-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	2126908	2146170	-

Transcript Sequence
>GWHTAAEX014359 AAAATAGATGGAGATGAGAGATGTTTGGAGAGAGATTTTGGTCTTTAAAATTTTCCATAATTATATTTTATTTTTTTATTATTAGAGGAAGGAGAAGCAATCACCTGTCTCAACACCTCTGATTCCAAGTATTGGATTCAGAAGATTGTTGCTCGGCATTATTGAATCTCTTTAAATTTTATATTCTTATTTGAATATTTTGGCATCATTAGTATTTTCTTCTGCTGAGATTGACTCTCAGCAGAAGAAGATATGCGCTGCGGCTGCGGTGACAGAGAAGATTAGGAAAGACTCTTCCATTTCGAAGAAGGAACGAAGAATGGAGGGTTGGTTATATCTAATTCGATCCAATCGGCTCGGCTTACAGTACTCGAGGAAAAGATACTTCAAGCTTAAGGGAAACTTTCTCAATTGCTACAAGAACATACCCAAATCATATAAAGAGGATGCTCTAAAAACTGCATTGATTGATTCCTGCATAACACTCGCTGACAATGGAAGAGAGACCTTTCATAAAAATGTTTTCTACATTTTTACACTATACAACTCTTCCAATCACAATGATCAACTGAAGCTTGGTGCCAAAAGCTCAGAAGAAGGAAGAAAATGGGTCCAATTATTAAAAGAAGCAGCAACGAAGGAATGCCCAGGCAATGGAGACAAGCATGTTCAGTGCTCAAAGACAAGACGTAGATCGTTCAGATTGTTAGCCCAAGCCAGGGGCAGAAATCGTCTACATTCTCTAGATTGGACAGTGTTTTCAACCGGGCACACTAAGCGATTAGCCTCCGATGTCATCATGCCATCACCTTGGACAATCTTTGACTTTAAAAACGGTTTGCGGCTATTTAAGGAAGCGAAGGATGCCAATTTTCTTGGGATGCATCGGAGTGATCATCCTGCCATAATGGCCGTAGGGGTTGTTGAGGCACCCTCGGAAACCATTTTTCAGACAGTGATGTCTTTCGGTCCCTCAAGATCAGAATGGGATTTCTGTCTAGCCAACGGCAGCGTGATCGAACATCTGGATGGCCACACTGATATCATCCACAAGAAACTAAGTGGAGATTGGTTGCCCTGGGGAATGAAGAGAAGGGATCTACTCTTAAGGCGTTACTGGAGAAAAGAAGATGATGGAACTTATGTTATTGTGTATCATTCGGTCTGCCATCCAAACTGTCAGCCAAAGCGAGGCTATATTAGAGTCTCCCTTAAAAGTGGAGGGTATGTGATATCTCCAGCGAACCAAGGAAGGCATTCTGTAGTGAAGCACATGCTTGCAATAGATTGGAGATTCTGGAAGCCTTATTCGCTAACCTCTTCTTCAAAATATGTAACAATCAGGATGCTTGCAAGAGTTGCAGCCTTAAGAGAATTTTTTCAAGCGAAGCATGGGAACTGCCCATGCTCCAATTTCTCTTCAAGTGGAAGAACAGGAGAGACACCTCTACACCCTCATGAAAGGGAATACATCAAGGAGGAGCTCAAGATGACAACTGATACAGTAAAGCCTGATGATTTATATGAAGATTTACAAATTCAACCACCTAAGCATTCAAATGTGGGAGGATCGATTGTTCAGAGTCAAGATGCTGCTGATGAATTTTATGACGTTCCAGATTCATCTGATGACTGCATTGGATCAGAGGTTGTATGGTCTTCCAGAGAAGATGTTGAATCCCAGGACCAACGCCATCCCATGCTATCAACAACAGCAGTGTTTGTGAAAAAATTACAGGATCTTGCAGCTGAAAGGAAATGTTATACTGATCTAAAAGAAGCCTCGGCAAAAAAAACAGAGCCCTACAGCTATGGAACTACTCTTCCAAATGACTCAAGCTGCACCATAAATTGTAGTTGGACCACTGCAGATCCTTCAACATTTCTGGTTCGCAGTGAATCCTACTTTAAAGATCATCAGAAGGTCAAAGCCAGCACTACATTGATGAAAATGGTAGCTGCTGATTGGCTGAAATCTGATAAACGTGAAGATGATCTTTCTGGTAGAGAAGGAGGAATAGTTCAGAGATACGCCAATCAAGGAAGCAATAACTTTTTCTTTATCATAAACATACAGGTTCCTGGTTTAACAGCTTATAATCTTGTTTTCTATTACATGCTGGATACGCCATTGGAGCATGTTCCTCTAATAGAGAATTTTGTCAAGGGTGATGATGCATACAGGAATTCAAGATTTAAGCTTATACCCTATATATCTAAGGGTTCCTGGATAGTAAAGCAAAGTGTGGGAAAAAAAGCATGTTTGCTGGGTCAAGCTCTTGAAATCAATTATTTCAGCGGGAGAAACTATCTTGAGCTTGGCATCAATATCGGTTCATCCACTGTTGCCAGAGGCGTTGCAAGCCTAGTACTCAGTTACCTAAACAATCTGGTGATAGAAATGGCCTTTGTAATACAGGGAAATACCCAAGAGGAATTACCAGAATTTCTTCTGGGAACCTGTAGATTGAACTATCTTGATGCCACCAAAGCTATCCATGTAGACTTATGTTGACATTAAAAGGTTTGACTACATCTATGGGAAGTAATAGCCGAAGTTGTACAAGTTTTTGTCCAAAGGTTGCTACAATATATGCTGAATTTATATTGTTACCCATACAGGTCATAATATGTCTGTCTGTACAAATAGTGAATATATTGTAAGTAAAAATAAAATTAACTAAACATGGCATGCTTACAAGTTTCCAGTCACAATATAGAGTTTAATTTTGGCACACTAGAAAGAAAACTTTTGAGGTGCAGAATTCTGAGAATGTGATGAGATGAAATATATATATGTGTGTGTGTGCGTGTTAATTTGATGGCTTTCATTGTCATATTTGAGAGAAGAAAATCATCATTTTTTGCTAGTTTCCTAAACATGACTGCAGAATTCTGAGAAATTTATAACAATGTTGTATGTGAAGAAAAAAAGCATCTTGAGCCCACACAAACATTTATTTTGAATGAAAGCGAT

Network for GWHGAAEX014359

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00169.28	PH	1	105	7.40E-08
PF01852.18	START	193	335	5.10E-20
PF07059.11	DUF1336	514	721	3.30E-66

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008289	Molecular Function	lipid binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.020
SRP064423	SRR2545915	Juvenile tuber	0.030
SRP108465	SRR5643513	five period of Gastrodia elata	4.680
	SRR5643514	five period of Gastrodia elata	5.210
	SRR5643515	five period of Gastrodia elata	3.390
	SRR5643524	five period of Gastrodia elata	5.710
	SRR5643525	five period of Gastrodia elata	22.670
	SRR5643528	five period of Gastrodia elata	16.750
	SRR5643658	five period of Gastrodia elata	37.190
	SRR5643659	five period of Gastrodia elata	1.420
	SRR5643660	five period of Gastrodia elata	2.010
	SRR5643661	five period of Gastrodia elata	0.830
	SRR5643662	five period of Gastrodia elata	2.300
	SRR5643663	five period of Gastrodia elata	1.530
	SRR5643664	five period of Gastrodia elata	1.950
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.110
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.330
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.510
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.970
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.480
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.350
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.710
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.380
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.370
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.400
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.190
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.190
SRP279888	Gastro	Gastrodia elata tuber	1.75
	Juven	Juvenile tuber	4.48
	Mother_Gastro	Mother tuber of Gastrodia elata	5.15
	Mother_Juven	Mother tuber of Juvenile	5.92