Detail information of GWHGAAEX014362/evm.TU.scaffold_59.118


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00483.00E-70Transcription factor, Myb superfamily
nrgi|510794182|gb|AGN52057.1|2.97E-81MYB-related transcription factor [Salvia miltiorrhiza]
Swissprottr|Q7XBH4|MYB4_ORYSJ3.00E-73Myb-related protein Myb4
trEMBLtr|A0A059PSM1|A0A059PSM1_SALMI1.00E-81MYB-related transcription factor {ECO:0000313|EMBL:AGN52057.1}
TAIRAT2G311803.00E-70myb domain protein 14

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006821815352182972+
Transcript Sequence

Network for GWHGAAEX014362

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14611.10E-15
PF00249.30Myb_DNA-binding671124.10E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.730
SRR2545915Juvenile tuber3.540
SRP108465SRR5643513five period of Gastrodia elata36.310
SRR5643514five period of Gastrodia elata23.410
SRR5643515five period of Gastrodia elata80.340
SRR5643524five period of Gastrodia elata48.290
SRR5643525five period of Gastrodia elata41.560
SRR5643528five period of Gastrodia elata27.740
SRR5643658five period of Gastrodia elata6.820
SRR5643659five period of Gastrodia elata10.010
SRR5643660five period of Gastrodia elata2.880
SRR5643661five period of Gastrodia elata10.360
SRR5643662five period of Gastrodia elata14.200
SRR5643663five period of Gastrodia elata5.200
SRR5643664five period of Gastrodia elata6.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.530
SRR6049655Rhizomagastrodiae_C368-T10_good_160.710
SRR6049656Rhizomagastrodiae_C368-T07_good_146.810
SRR6049657Rhizomagastrodiae_C368-T07_good_119.520
SRR6049658Rhizomagastrodiae_C368-T04_good_142.530
SRR6049659Rhizomagastrodiae_C368-T04_good_152.730
SRR6049660Rhizomagastrodiae_C368-T01_good_134.070
SRR6049661Rhizomagastrodiae_C368-T04_good_125.060
SRR6049662Rhizomagastrodiae_C368-T01_good_119.760
SRR6049663Rhizomagastrodiae_C368-T01_good_176.580
SRR6049664Rhizomagastrodiae_C368-T10_good_170.970
SRR6049665Rhizomagastrodiae_C368-T10_good_170.970
SRP279888GastroGastrodia elata tuber 8.07
JuvenJuvenile tuber1.48
Mother_GastroMother tuber of Gastrodia elata 34.78
Mother_JuvenMother tuber of Juvenile 8.25