Detail information of GWHGAAEX014373/evm.TU.scaffold_59.132


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743873422|ref|XP_010906808.1|4.88E-74PREDICTED: LOW QUALITY PROTEIN: protein G1-like4 [Elaeis guineensis]
Swissprottr|Q9FGH2|LSH5_ARATH4.00E-73Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5
trEMBLtr|A0A022S3W9|A0A022S3W9_ERYGU4.00E-69Uncharacterized protein {ECO:0000313|EMBL:EYU45980.1}
TAIRAT5G585001.00E-72Protein of unknown function (DUF640)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006824641462471861+
Transcript Sequence

Network for GWHGAAEX014373

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04852.11DUF6401793021.30E-62
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.570
SRR2545915Juvenile tuber58.520
SRP108465SRR5643513five period of Gastrodia elata92.310
SRR5643514five period of Gastrodia elata26.370
SRR5643515five period of Gastrodia elata110.680
SRR5643524five period of Gastrodia elata36.830
SRR5643525five period of Gastrodia elata2.420
SRR5643528five period of Gastrodia elata0.600
SRR5643658five period of Gastrodia elata0.900
SRR5643659five period of Gastrodia elata371.950
SRR5643660five period of Gastrodia elata472.370
SRR5643661five period of Gastrodia elata481.930
SRR5643662five period of Gastrodia elata311.040
SRR5643663five period of Gastrodia elata214.990
SRR5643664five period of Gastrodia elata358.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_171.300
SRR6049655Rhizomagastrodiae_C368-T10_good_114.910
SRR6049656Rhizomagastrodiae_C368-T07_good_156.310
SRR6049657Rhizomagastrodiae_C368-T07_good_161.560
SRR6049658Rhizomagastrodiae_C368-T04_good_152.820
SRR6049659Rhizomagastrodiae_C368-T04_good_127.970
SRR6049660Rhizomagastrodiae_C368-T01_good_120.320
SRR6049661Rhizomagastrodiae_C368-T04_good_159.930
SRR6049662Rhizomagastrodiae_C368-T01_good_123.460
SRR6049663Rhizomagastrodiae_C368-T01_good_114.320
SRR6049664Rhizomagastrodiae_C368-T10_good_15.560
SRR6049665Rhizomagastrodiae_C368-T10_good_15.560
SRP279888GastroGastrodia elata tuber 216.00
JuvenJuvenile tuber15.20
Mother_GastroMother tuber of Gastrodia elata 24.30
Mother_JuvenMother tuber of Juvenile 20.13