Detail information of GWHGAAEX014377/evm.TU.scaffold_59.140
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|284046824|ref|YP_003397164.1| | 4.00E-69 | glucose-methanol-choline oxidoreductase [Conexibacter woesei DSM 14684] |
| nr | gi|743829954|ref|XP_010934290.1| | 0 | PREDICTED: long-chain-alcohol oxidase FAO2-like [Elaeis guineensis] |
| Swissprot | tr|B5WWZ9|FAO2_LOTJA | 0 | Long-chain-alcohol oxidase FAO2 |
| trEMBL | tr|I1N9S7|I1N9S7_SOYBN | 0 | Long-chain-alcohol oxidase {ECO:0000256|PIRNR:PIRNR028937} |
| TAIR | AT4G28570 | 0 | Long-chain fatty alcohol dehydrogenase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000068 | 2753928 | 2766587 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014377
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00732.18 | GMC_oxred_N | 250 | 516 | 2.20E-66 |
| PF05199.12 | GMC_oxred_C | 603 | 737 | 2.40E-22 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0046577 | Molecular Function | long-chain-alcohol oxidase activity |
| GO:0016614 | Molecular Function | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | Molecular Function | flavin adenine dinucleotide binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.700 |
| SRR2545915 | Juvenile tuber | 27.450 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 33.190 |
| SRR5643514 | five period of Gastrodia elata | 24.960 | |
| SRR5643515 | five period of Gastrodia elata | 22.390 | |
| SRR5643524 | five period of Gastrodia elata | 28.230 | |
| SRR5643525 | five period of Gastrodia elata | 35.320 | |
| SRR5643528 | five period of Gastrodia elata | 32.130 | |
| SRR5643658 | five period of Gastrodia elata | 39.590 | |
| SRR5643659 | five period of Gastrodia elata | 13.610 | |
| SRR5643660 | five period of Gastrodia elata | 14.250 | |
| SRR5643661 | five period of Gastrodia elata | 12.860 | |
| SRR5643662 | five period of Gastrodia elata | 9.440 | |
| SRR5643663 | five period of Gastrodia elata | 12.960 | |
| SRR5643664 | five period of Gastrodia elata | 11.080 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.630 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 20.680 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 24.020 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 33.910 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 29.780 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 37.080 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 27.650 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 38.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 21.020 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.720 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 19.410 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 19.410 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 19.70 |
| Juven | Juvenile tuber | 35.22 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 39.98 | |
| Mother_Juven | Mother tuber of Juvenile | 43.78 |