Detail information of GWHGAAEX014383/evm.TU.scaffold_59.147
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|159896834|ref|YP_001543081.1| | 2.00E-91 | hypothetical protein Haur_0301 [Herpetosiphon aurantiacus DSM 785] |
| KOG | KOG2119 | 0 | Predicted bile acid beta-glucosidase |
| nr | gi|672165047|ref|XP_008802418.1| | 0 | PREDICTED: non-lysosomal glucosylceramidase-like [Phoenix dactylifera] |
| trEMBL | tr|B8BHF7|B8BHF7_ORYSI | 0 | Non-lysosomal glucosylceramidase {ECO:0000256|PIRNR:PIRNR028944} |
| TAIR | AT3G24180 | 0 | Beta-glucosidase, GBA2 type family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000068 | 2861604 | 2885192 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014383
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF12215.7 | Glyco_hydr_116N | 102 | 421 | 6.40E-109 |
| PF04685.12 | DUF608 | 560 | 921 | 8.10E-155 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH116 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K17108 | GBA2 | Metabolic pathways | map01100 |
| Sphingolipid metabolism | map00600 | ||
| Other glycan degradation | map00511 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006680 | Biological Process | glucosylceramide catabolic process |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004348 | Molecular Function | glucosylceramidase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 34.760 |
| SRR2545915 | Juvenile tuber | 35.170 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 40.940 |
| SRR5643514 | five period of Gastrodia elata | 35.250 | |
| SRR5643515 | five period of Gastrodia elata | 44.140 | |
| SRR5643524 | five period of Gastrodia elata | 40.640 | |
| SRR5643525 | five period of Gastrodia elata | 67.670 | |
| SRR5643528 | five period of Gastrodia elata | 63.350 | |
| SRR5643658 | five period of Gastrodia elata | 76.790 | |
| SRR5643659 | five period of Gastrodia elata | 54.390 | |
| SRR5643660 | five period of Gastrodia elata | 57.870 | |
| SRR5643661 | five period of Gastrodia elata | 58.830 | |
| SRR5643662 | five period of Gastrodia elata | 69.650 | |
| SRR5643663 | five period of Gastrodia elata | 58.570 | |
| SRR5643664 | five period of Gastrodia elata | 71.180 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 46.990 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 36.030 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 40.280 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 53.880 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 58.570 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 66.180 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 48.430 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 52.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 34.250 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 38.170 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 34.180 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 34.180 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 70.72 |
| Juven | Juvenile tuber | 51.02 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 76.41 | |
| Mother_Juven | Mother tuber of Juvenile | 55.04 |