Gene detail

Detail information of GWHGAAEX014388/evm.TU.scaffold_59.153

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|16331651\|ref\|NP_442379.1\|	2.00E-26	cyanate hydratase [Synechocystis sp. PCC 6803]
nr	gi\|672123616\|ref\|XP_008785176.1\|	8.41E-89	PREDICTED: cyanate hydratase isoform X3 [Phoenix dactylifera]
Swissprot	tr\|B9T3R0\|CYNS_RICCO	5.00E-86	Cyanate hydratase {ECO:0000255\|HAMAP-Rule:MF_03139}
trEMBL	tr\|M0UZA5\|M0UZA5_HORVD	3.00E-85	Cyanate hydratase {ECO:0000256\|HAMAP-Rule:MF_03139}
TAIR	AT3G23490	5.00E-81	cyanase

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	2965629	2975671	+

Transcript Sequence
>GWHTAAEX014388 CATTTCTTCATCGTACTCTCCGACCTTACCGGTGCCGCTCTTTTCTCGCCGAAATGCTCCGTCTGCCTCTTTGTCGGCGGCGGCATTGTAAAACGGTTGGGACTCAAACCTGAGCAAACAGCTGAAGTCGTATGCGCTCTCCAACGACACCCGCCAAACTTACTCTTCAAGCAGTCCGAGCAAGACTCGTCAGGCAGGTCGAGGGTGCCGCCACTCTCTCCGGTGGCGAACCTGGCCGGGGACTGGGCGACGTCTGTAGCTAGCCTGTACAGCAGCTGCCATACTCTCTCCTTGAAAGCCGCGGGATCAGTGGCGTTTTCGACGCTGTCCAAGCCGAGGTCGTTCTTCTTCGTCTGGCGCTTTCTGTCAGGCTATCGGAAGCTGCAGGCAATCCAAGAAGTCCAAGCCGAGGTCGTTCTTCCTCGTCTGGGCATGCTGAACTTCTTCCCCTTTTTGATGGAGGCCAACAGGAGGGCTTTCAAAAGGTTTTGCAGGGGATTCGAGAACCAGAGACGAAGCGCTTGCTGTGAATATCCTCTCGATATGGCACTACTGCATCAGCTTAGCGTTCTTCTCCGCCTAGCTGCCGATGGTGATTTGCATTAACTCGATTGATGCTTCCAGGGACAGAAACAACGGGTTGAATCTCCCAACCAATCCGGACGTGTTCATAGTGCCGCTGCACCGGTGGAAGACGATCACGACGTTGTTACGGCGTTGTTCTTCACCTCACTCCCATGGTCGCCTAGGACGGCAACCTTCCCTCTTCATCCGCAATTTTACCGCCCCTGCCATCTCCCTCTTTAGCCACGTCAGCGGAAGACGTGGCCCTAAATACCTAGACATAAGTCAACGCACAAACGCAAGAGACGAGTGAAGGTGGGTGCCATGGGTACAGCATTTCTCTTAATAAATACCGTATCATTAGGAAGCAGGCATAACTCATCCCTAAAGCCTCTATAGCACCGCGCCACGCTTCCGTTACTTCAGTTCATCGAGCGTAAAGCCGAGTAAGAACTATGGAGGACGCAGGCGGATCGACGGCGGCGAGTGTAGTGGTTTCGAGGTTGGTTGCCGCAAAGCAAGCGTCGGGGAAGACCTTAGGGCAGATCGCGGCTGAAACTGGTCTGACCAATGTCTATGTAGCTCAGCTCTTCCGCCGCCAAGCCCAGCTCAAGCCCGACACCGCTGCTTCTCTTCGATCTGCTGTCCCAAACCTCTCCGACGAGCTTCTCTCGGAGATGATGGCTCCTCCCTTTCGATCCTACAACCCTAACATCATCCAAGAGCCCGCCATCTATAGGATAAATGAAGCTGTTATGCACTTCGGTGAGAGCATCAAAGAAATCATCAATGAGGATTTTGGTGATGGCATAATGTCTGCTATAGATTTCTATTGCTCTGTTGACAAGGTTAAAGGTGTTGATGGGAAGGATCGTGTGGTGGTCACTTTCGATGGGAAGTATCTTCCTTACAGTGAGCAGGAGAAAGAGGAAGACTATAAAAGATATTGGAAGAAACAAATAGGATGGACCTTCTTTAATTTTACCTTAGGTAGGGACTGCTATTTGATCACACACAATGGAAACAAAGGACTCATGTATTCGATTCAACCTAGTGGGACCAAGGCTTAGTATTTTTGTTGTTGTTGTGTGAATTATGAAGTTCATTCTTTCAAATTGATCTTCTTGAACAAATTTCAGTACCATAAGCCTGCATTCAAAACTTAAATTTTGTTACAGTTTTGGCTCTGCACTATATGACATTCATTTTTAGCAGTTTTTCTATTTGTTTTTTTCTTAAACACTTGCATGACACCTAAATCTTGGACATGTCTAATGCCGAAAATTTGATATTTACAAAAAATTATGTATTCTTAGAATCTAATTCACTTTTAGCAATTGAAAGAAAGCCATATTGGTTTGTTGTAGTATTTGTATGTTAATCAGAATTTGGATTATAATACAGTAAAATAGTTTTTTGATTACCTTAATTTGACCATTCTGTCCCTAATTATTCAATTTGTTCAATGTAATCCCCCAACAGTACTCTGTTAAATTTAGTACTTCTGTTATTTATTTTGAAATCAATTCAATTCCAAGAAATAAAAAATGCAATTAAATTGATCTTAAAATACTTAGCAGAGGGACTGGTGGAAATTGAACTGTCTGGGCCTAAATTTGCCAAGGCTAAATAGTCAAAGAAAATTGAACTTATATGGCAATTACTCCAAAATATTTTTGAACTATGAAGCCTAAAGAGTGAAGTCTGTGGTGGTAAACCAGTATCTGTTTTTTTTTTTGTTTTTTAAGTTTAAGTCACTAACTATAGCATATAGGGATTTTTATTATTTTGGCTGTTAACCTAACAAAAATTGTAAGATCTTTCATTTCAGCTACCATAGTTTATTTTTTCTGAGTCTCGATTTTTTTCCTTCATCGATCTTTTTTTATTCTTTGCAGAGATCTGAGCATATGGTTTCAAGGCTTACGAAACAGTAATGCAGTGTTCCTAAATGTAAAATAATTTTCTTTAGATCGTTATCTGTTAACCATTTTGTGTGCTTAGAACTGTGCAAACAATTGCGTAAACATGAATATTTTGTGTATTTCCTGCGCTGATTCCTCTTTGTATTTCTGATTTATTCTCAATTTTCTAATCTTGATAAATTGCCAAATCTTAGCTAGTTTGAAGTCTTAAATTTTCA

Network for GWHGAAEX014388

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02560.13	Cyanate_lyase	86	153	1.50E-30

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01725	cynS	Metabolic pathways	map01100
K01725	cynS	Nitrogen metabolism	map00910

Gene Ontology

GO term	Ontology	Name
GO:0009439	Biological Process	cyanate metabolic process
GO:0003677	Molecular Function	DNA binding
GO:0008824	Molecular Function	cyanate hydratase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.500
SRP064423	SRR2545915	Juvenile tuber	7.450
SRP108465	SRR5643513	five period of Gastrodia elata	31.590
	SRR5643514	five period of Gastrodia elata	22.520
	SRR5643515	five period of Gastrodia elata	40.970
	SRR5643524	five period of Gastrodia elata	29.510
	SRR5643525	five period of Gastrodia elata	7.730
	SRR5643528	five period of Gastrodia elata	8.460
	SRR5643658	five period of Gastrodia elata	8.850
	SRR5643659	five period of Gastrodia elata	18.570
	SRR5643660	five period of Gastrodia elata	17.140
	SRR5643661	five period of Gastrodia elata	19.090
	SRR5643662	five period of Gastrodia elata	18.410
	SRR5643663	five period of Gastrodia elata	14.880
	SRR5643664	five period of Gastrodia elata	15.100
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.600
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	39.090
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.750
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.210
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	10.670
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.920
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	16.070
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.760
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.970
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	13.720
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	14.580
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	14.580
SRP279888	Gastro	Gastrodia elata tuber	13.32
	Juven	Juvenile tuber	21.05
	Mother_Gastro	Mother tuber of Gastrodia elata	11.78
	Mother_Juven	Mother tuber of Juvenile	10.71