Gene detail

Detail information of GWHGAAEX014391/evm.TU.scaffold_59.156

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672123928\|ref\|XP_008785335.1\|	PREDICTED: uncharacterized protein LOC103703999 [Phoenix dactylifera]
trEMBL	tr\|C5WYX9\|C5WYX9_SORBI	Putative uncharacterized protein Sb01g047700 {ECO:0000313\|EMBL:EER92892.1}
TAIR	AT2G33420	Protein of unknown function (DUF810)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	3059267	3062975	-

Transcript Sequence
>GWHTAAEX014391 AACTAATTGATCTGTCAAAATTCTGCTCACCACAACACAATCCTTAATTAATGAATTGAACAACCAAGCAATTATCTCAAATTTCAATTTCAGCATGGCTAAAAGCAAAATAACAAAAATATATTAACTAAAAATAAAAATAAATAAAAAGAGAAAAATCAGCGTGTGGGCGGGTGGGGCCCGGCCAAATCTCAAAATCGTTCCCTCATCGCCGGCCTCCCTCCCGGCCATGGCTCCCGTGGCCTCCTCCCATTCTTCCATCTCCGCCGGCGGAGAATCGGGAGCATCCGTAACCTCCGGCGACATCGACATTGATTGGCCCTTCGGCGCCAGCCTCGGCACCTTCCGCCGCGCCGAGCTCAGGGACACCGCCTACGAAATTTTCTTCATGTCCTGCCGTTCCTCCCCCGGCTTCGGCAACATCCGCGGGGCATCATCCATCGCGTATGTTGGAAGCAGCGGCGAAGTCATTGAAATCGTCTCCTCCACGCCGCAGCCTCTGCCTCCTGTCGTCGGCCCCAAAGGCGGGACCGGAATGATGGTAGTCACCAGCAGAGTGAAGAGCACCCTCGGCCTGAAATCCCGCCGCCCGCCTCCAACGCGCACGATGGGGCAACAAAGATCGGCAGCGTCAATCCTTTCCTCCGCTGCCATCGCCGCATCAAATTCCCCCAGCCGAAATGCCGTTCCCAGTTCACCCGGAAGATTCAAACCGCCGAAGACCTCCGCCGAGATCATGCAGCAGCAGATGCGCGTCGCCGATCAGAGCAACGACAGATTGAAAAAGATCCTCACCCGGAGCTTCGTCGGGCAGAATGGAGGGAGGGCGGAGACCATAATCCTCCCCCTCGAGCTCCTCCGCCGCATGAAACCCTCCGAATTCGGCGACCTCCAAGAGTACCATCGATGGCAGCGGCGGCAGCTCAAGGTCCTCGAGGCGGGGCTCCTCCTCCACCCCTTCCTTCCGCTCGACCGCCTCAACGCTTCGGCCCTCAGGCTCCGCGAGATCCTCCTGCAGAGCGAGTCGAAGGCCATCGACATGAGCAAGAACCCCGAAGCAATGCGAAGCCTCGCCGGCGCCGTGACGTCCCTCGTCTGGAGAAACGCCGCTGGGCCGAGTGCCGCTGGTAGCTGCTGCCACTGGGCTGACGGATTTCCCGTCAACGTCTACCTCTACCTTCCTCTCCTTAAATCCATCTTTGATACTCGGGAGGAGACCCTCATCCTCGATGAAGTCGACGAGCTCCTGGAGCTCATCAAGAAGACATGGCCTACCTTGGGGATCAACCGCATGATCCACAATGCGTGCTTTGCCTGGACTCTGTTCCAGCAGTACGTTGCCACCGGCCAGGTCGAGCCGGATTTGATCAAGGCGACCCTCAGCATGCTGTCGGAAGTGGCAGGCGACGCCAAAAGGGCGGCGGACCACCCGGAGCCGAGCTACACAAGAGTGCTCTCCGGCGTGCTGGCGTCCATACAGGGGTGGACGGAGAAGCGGCTGCTTGACTACCATGAGAATTTCGGCAGGGGAAACCCGGCGAGCATGGAGAAGATCCTCTCCTTGGCGCTGTCCGCCGGTAGAATCCTCACCGAAGACCTTCCGGGGATGGCGGGGACCACTCCAGGGCTCTCCGAAAGGATCCCAGCCATCACCGGCCGGGTGGAGCTCTACATCCAGCGATCGTTGCGCAACGCCTTCACCAGGCTGTTCGAGACGGGGCACGGCCACGTCGACAGCATGATCGTGGAGGTCGACGAGGATCCCGGCGACATCCTGATCCAGCTGGCGAAGGACACTGAGGCACTGGCGGCCAACGAAAGGGACAGCTTCAGCCCCGTACTCCGGCAATGGTGCCCTTCGGCGACCGGGGTGGCGCTGGCCACCCTGCACAACTGCTTCGGGATCATATTGAAGCAGTACCTGGCTAAGGTCAGCAGCCTCACCAGCAGTCTGGTCAGGGTCCTGCATTGCGCCAGCAGGCTCGAGAAGTTGCTGATGCAGATGGTTGCCGATGATGCCGCCGCCGACAACGACGTCGACGGAACCAGCAGGAGCCTTCTTAGAGGGATGGTGCCCTTCGGGGTCGACGCGATCGCCGTGGGGCTTCTCAAGTCCTGGGTGGAGGAGAGGCTCAAGATTGGGAGGGAGCATGTCAAACGAGCCAAAGAGACTGAGAATTGGTCGGGCGTATCCGAAAGCGAGCCATTCACTCATTCAGCCGTGACTCTGGTGAAGCTGGCCAACATGACTGTAGCGGAGTTCTTCAAGATCCCAATGCCGGCAAGGGATGACTTGGTGCACGACCTAGCCGAGGGACTCGAGGCCATCTTTCAAGACTACGCCAACTTCGTCGCTTCCTGCGGTAAACGGCAGAGCTTCGTGCCGATGCTACCTCCGCTGACGCGGTGCAACCAGGACTCGAGATTGACGAAGCTTCTGAAGAAGGCAAAGCCGTGCGCATCTGGATCGGACAGCGAGCAGGCGGCAGCAGCAGGCAGCGCAGGGCCAGCCGCAGCCACGCCAACGAAGGAGGCAAATAACCCGCGGCCATCGACCAGCCGAGGAACGCGCCGGCTGTACATCCGAATCAATACCCTCTACTACCTTCACTCGCACATCCACTCCCTGGACAAGTCGCTCACCTTCTTTTCTCGAGGAAGAGGCGGAGGAGGTGTTTCAGCTCACCCGATTATCCAAGCGAACCGCCGCCTGGCCCCCGCCACGCACTTCGACCTCCTCCGCGCCTCGATCCAGGCCTCCATCCAGCGCGTTTCCGAGGTCGCCGCCTACCGCCTCATCTTCCTCGACTGCGGCCAATCCTTCTACGGCAGCCTCTATGTGGAGGATGTCGCCGGATCCAGAATCCGCCCGGCGCTCAGGACCCTGAAGCAGAATCTCAAGTACATGCGGCTGGAGAAGGTGCTCACAAACCGAGCCCAGCCGGCGACGGTGAAGGAGGTGATGAGAGCCGCCTTCGAGGCTTTCCTCATGGTGCTGCTCGCCGGAGGCTCGGAGAGGGCTTTCTCCCGAGCGGACTACAATATTGTGCTGGAGGATTTCAGGAGCCTGAAGAGGCTCTTCTGCTCCTCCGAGGTCGGGATGGTGCAGCAGGACGTGGTGGAAACTGAAGCCGAGCCTGCTGGCAGCATCATCGAGCTCATGAGCTTGCCCACTGAGCAGCTCATCGAGGATTTCATGGCCGCGGCAAGAAACGCTGCCAGATTTGCCGGCGACTACCAGAGGTTAATCATTCCGCCGACCCCCAGCAGGTGGAAACGATCCGATCCTAACACCGTGCTTCGAGTCATCTGCCATCGGAACGATGATGCCGCCAATAATTTCTTGAAGAGGGCTTTGCAGCTGCCCAAAAGAAGATAGACGATATCGATTCCCTCTCTCCTTCCTTGCTGTTTTGCCGCATGAATACAGTGTACATAGCTTTTCTTTGCGATAAAGGATTGCTTATTTTGATGACTGTAAATAGTTTTTTTTTTTTATATATAAGTTAATGAAAAAGCTAGTTTTTGTTGAGTACGAAGG

Network for GWHGAAEX014391

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05664.10	DUF810	41	802	2.00E-241

Protein Sequence

>GWHPAAEX014391
MAPVASSHSSISAGGESGASVTSGDIDIDWPFGASLGTFRRAELRDTAYEIFFMSCRSSPGFGNIRGASSIAYVGSSGEVIEIVSSTPQPLPPVVGPKGGTGMMVVTSRVKSTLGLKSRRPPPTRTMGQQRSAASILSSAAIAASNSPSRNAVPSSPGRFKPPKTSAEIMQQQMRVADQSNDRLKKILTRSFVGQNGGRAETIILPLELLRRMKPSEFGDLQEYHRWQRRQLKVLEAGLLLHPFLPLDRLNASALRLREILLQSESKAIDMSKNPEAMRSLAGAVTSLVWRNAAGPSAAGSCCHWADGFPVNVYLYLPLLKSIFDTREETLILDEVDELLELIKKTWPTLGINRMIHNACFAWTLFQQYVATGQVEPDLIKATLSMLSEVAGDAKRAADHPEPSYTRVLSGVLASIQGWTEKRLLDYHENFGRGNPASMEKILSLALSAGRILTEDLPGMAGTTPGLSERIPAITGRVELYIQRSLRNAFTRLFETGHGHVDSMIVEVDEDPGDILIQLAKDTEALAANERDSFSPVLRQWCPSATGVALATLHNCFGIILKQYLAKVSSLTSSLVRVLHCASRLEKLLMQMVADDAAADNDVDGTSRSLLRGMVPFGVDAIAVGLLKSWVEERLKIGREHVKRAKETENWSGVSESEPFTHSAVTLVKLANMTVAEFFKIPMPARDDLVHDLAEGLEAIFQDYANFVASCGKRQSFVPMLPPLTRCNQDSRLTKLLKKAKPCASGSDSEQAAAAGSAGPAAATPTKEANNPRPSTSRGTRRLYIRINTLYYLHSHIHSLDKSLTFFSRGRGGGGVSAHPIIQANRRLAPATHFDLLRASIQASIQRVSEVAAYRLIFLDCGQSFYGSLYVEDVAGSRIRPALRTLKQNLKYMRLEKVLTNRAQPATVKEVMRAAFEAFLMVLLAGGSERAFSRADYNIVLEDFRSLKRLFCSSEVGMVQQDVVETEAEPAGSIIELMSLPTEQLIEDFMAAARNAARFAGDYQRLIIPPTPSRWKRSDPNTVLRVICHRNDDAANNFLKRALQLPKRR

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.510
SRP064423	SRR2545915	Juvenile tuber	2.290
SRP108465	SRR5643513	five period of Gastrodia elata	5.130
	SRR5643514	five period of Gastrodia elata	4.420
	SRR5643515	five period of Gastrodia elata	4.250
	SRR5643524	five period of Gastrodia elata	4.200
	SRR5643525	five period of Gastrodia elata	5.080
	SRR5643528	five period of Gastrodia elata	5.850
	SRR5643658	five period of Gastrodia elata	2.960
	SRR5643659	five period of Gastrodia elata	6.230
	SRR5643660	five period of Gastrodia elata	7.550
	SRR5643661	five period of Gastrodia elata	5.730
	SRR5643662	five period of Gastrodia elata	5.130
	SRR5643663	five period of Gastrodia elata	5.840
	SRR5643664	five period of Gastrodia elata	8.670
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.150
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.800
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.010
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.750
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.880
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.720
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.920
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.700
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.250
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.460
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.460
SRP279888	Gastro	Gastrodia elata tuber	5.27
	Juven	Juvenile tuber	3.23
	Mother_Gastro	Mother tuber of Gastrodia elata	2.77
	Mother_Juven	Mother tuber of Juvenile	1.80