Detail information of GWHGAAEX014408/evm.TU.scaffold_59.175


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25692.00E-33G protein-coupled seven transmembrane receptor
nrgi|357164594|ref|XP_003580105.1|3.23E-45PREDICTED: protein GPR107-like [Brachypodium distachyon]
trEMBLtr|I1IZH9|I1IZH9_BRADI1.00E-45Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI5G15250.1}
TAIRAT5G185202.00E-33Lung seven transmembrane receptor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006833427773343160-
Transcript Sequence

Network for GWHGAAEX014408

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06814.12Lung_7-TM_R151277.30E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.560
SRR2545915Juvenile tuber6.200
SRP108465SRR5643513five period of Gastrodia elata14.740
SRR5643514five period of Gastrodia elata11.720
SRR5643515five period of Gastrodia elata19.660
SRR5643524five period of Gastrodia elata11.330
SRR5643525five period of Gastrodia elata10.290
SRR5643528five period of Gastrodia elata20.080
SRR5643658five period of Gastrodia elata16.220
SRR5643659five period of Gastrodia elata17.180
SRR5643660five period of Gastrodia elata14.260
SRR5643661five period of Gastrodia elata14.260
SRR5643662five period of Gastrodia elata16.000
SRR5643663five period of Gastrodia elata17.290
SRR5643664five period of Gastrodia elata13.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.850
SRR6049655Rhizomagastrodiae_C368-T10_good_12.430
SRR6049656Rhizomagastrodiae_C368-T07_good_116.930
SRR6049657Rhizomagastrodiae_C368-T07_good_122.110
SRR6049658Rhizomagastrodiae_C368-T04_good_122.880
SRR6049659Rhizomagastrodiae_C368-T04_good_123.000
SRR6049660Rhizomagastrodiae_C368-T01_good_121.350
SRR6049661Rhizomagastrodiae_C368-T04_good_122.560
SRR6049662Rhizomagastrodiae_C368-T01_good_122.070
SRR6049663Rhizomagastrodiae_C368-T01_good_119.340
SRR6049664Rhizomagastrodiae_C368-T10_good_120.890
SRR6049665Rhizomagastrodiae_C368-T10_good_120.890
SRP279888GastroGastrodia elata tuber 7.19
JuvenJuvenile tuber5.89
Mother_GastroMother tuber of Gastrodia elata 17.64
Mother_JuvenMother tuber of Juvenile 14.00