Detail information of GWHGAAEX014412/evm.TU.scaffold_59.179


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00483.00E-64Transcription factor, Myb superfamily
nrgi|672181218|ref|XP_008810819.1|1.64E-77PREDICTED: transcription factor MYB57-like [Phoenix dactylifera]
Swissprottr|P81391|MYB05_ANTMA2.00E-50Myb-related protein 305
trEMBLtr|J3LEU7|J3LEU7_ORYBR3.00E-75Uncharacterized protein {ECO:0000313|EnsemblPlants:OB02G31640.1}
TAIRAT4G134803.00E-64myb domain protein 79

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006833498663351087-
Transcript Sequence

Network for GWHGAAEX014412

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding17641.70E-16
PF00249.30Myb_DNA-binding701143.20E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.500
SRR2545915Juvenile tuber13.940
SRP108465SRR5643513five period of Gastrodia elata13.390
SRR5643514five period of Gastrodia elata7.900
SRR5643515five period of Gastrodia elata38.600
SRR5643524five period of Gastrodia elata7.540
SRR5643525five period of Gastrodia elata96.000
SRR5643528five period of Gastrodia elata30.880
SRR5643658five period of Gastrodia elata46.520
SRR5643659five period of Gastrodia elata7.990
SRR5643660five period of Gastrodia elata4.320
SRR5643661five period of Gastrodia elata9.850
SRR5643662five period of Gastrodia elata7.620
SRR5643663five period of Gastrodia elata12.430
SRR5643664five period of Gastrodia elata22.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.050
SRR6049655Rhizomagastrodiae_C368-T10_good_147.620
SRR6049656Rhizomagastrodiae_C368-T07_good_130.770
SRR6049657Rhizomagastrodiae_C368-T07_good_128.020
SRR6049658Rhizomagastrodiae_C368-T04_good_113.910
SRR6049659Rhizomagastrodiae_C368-T04_good_111.750
SRR6049660Rhizomagastrodiae_C368-T01_good_153.820
SRR6049661Rhizomagastrodiae_C368-T04_good_122.930
SRR6049662Rhizomagastrodiae_C368-T01_good_134.100
SRR6049663Rhizomagastrodiae_C368-T01_good_146.890
SRR6049664Rhizomagastrodiae_C368-T10_good_145.390
SRR6049665Rhizomagastrodiae_C368-T10_good_145.390
SRP279888GastroGastrodia elata tuber 1.89
JuvenJuvenile tuber2.47
Mother_GastroMother tuber of Gastrodia elata 33.99
Mother_JuvenMother tuber of Juvenile 9.92