Detail information of GWHGAAEX014415/evm.TU.scaffold_59.184
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|284166917|ref|YP_003405196.1| | 2.00E-40 | sugar transporter [Haloterrigena turkmenica DSM 5511] |
| KOG | KOG0254 | 0 | Predicted transporter (major facilitator superfamily) |
| nr | gi|672201374|ref|XP_008778122.1| | 0 | PREDICTED: monosaccharide-sensing protein 2-like [Phoenix dactylifera] |
| Swissprot | tr|Q8LPQ8|MSSP2_ARATH | 0 | Monosaccharide-sensing protein 2 |
| trEMBL | tr|M0SYW6|M0SYW6_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P15870_001} |
| TAIR | AT4G35300 | 0 | tonoplast monosaccharide transporter2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000068 | 3428370 | 3446050 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014415
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00083.23 | Sugar_tr | 8 | 221 | 4.50E-53 |
| PF00083.23 | Sugar_tr | 503 | 727 | 2.70E-40 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
| GO:0016020 | Cellular Component | membrane |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 11.740 |
| SRR2545915 | Juvenile tuber | 8.200 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 10.450 |
| SRR5643514 | five period of Gastrodia elata | 10.340 | |
| SRR5643515 | five period of Gastrodia elata | 7.670 | |
| SRR5643524 | five period of Gastrodia elata | 8.770 | |
| SRR5643525 | five period of Gastrodia elata | 10.850 | |
| SRR5643528 | five period of Gastrodia elata | 6.870 | |
| SRR5643658 | five period of Gastrodia elata | 10.910 | |
| SRR5643659 | five period of Gastrodia elata | 9.870 | |
| SRR5643660 | five period of Gastrodia elata | 9.560 | |
| SRR5643661 | five period of Gastrodia elata | 10.400 | |
| SRR5643662 | five period of Gastrodia elata | 9.470 | |
| SRR5643663 | five period of Gastrodia elata | 12.610 | |
| SRR5643664 | five period of Gastrodia elata | 9.520 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.100 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.340 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.850 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 14.110 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 13.030 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.450 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 15.120 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 14.580 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.860 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 15.830 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 14.960 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 14.960 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.60 |
| Juven | Juvenile tuber | 12.45 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.57 | |
| Mother_Juven | Mother tuber of Juvenile | 3.74 |