Gene detail

Detail information of GWHGAAEX014424/evm.TU.scaffold_59.200

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|521464512\|ref\|YP_008151634.1\|	9.00E-30	hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
KOG	KOG1187	0	Serine/threonine protein kinase
nr	gi\|695075931\|ref\|XP_009385224.1\|	0	PREDICTED: receptor-like protein kinase ANXUR1 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9SR05\|ANX1_ARATH	0	Receptor-like protein kinase ANXUR1 (Precursor)
trEMBL	tr\|A0A061ENY9\|A0A061ENY9_THECC	0	Malectin/receptor-like protein kinase family protein, putative {ECO:0000313\|EMBL:EOY06725.1}
TAIR	AT3G04690	0	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	3738133	3741125	-

Transcript Sequence
>GWHTAAEX014424 CGGAGCTGAACCTCTTTTATTATCTTTAAGCAAAACAGCCCAACTAAAACACAATGAAGAATTTCCAGCCTTTCATTCCCGCGCTCCCCGCCTTTCGTTCCCTTCCAATTTTCCCCTTCGGCCATTGTTCTCTTCCTCCACCTGTATGCCGGAGGTGAACCCCTTCTCTTTTCCTGCACGCCTCTGTATAAGAAAATGCCAATTCCAATCTTCATCCTCCTCCTCCACCTCTCACTCTCCTTTCCCAGCAATCCTGTCTCCGCAGCAACCAAACCCGTGCTTCTCAATTGCGGCTCATCCTCCGTCGAATCAGATGCGGACGGCCGCAAATGGATTGGCGATTTGTCCCCAAACGCATCAGCCGCCGGAGTCATCCCGGCTAACCAAACAACCCCTTCGACCGCCTCATTCCAGGACCCATCCCTACCCTCCTCCGTCCCCTACATGACTGCCGCCGTCTTCCGCTCCGAAGTCACCTATCGATTCTTCGTGACCCCGAAGACGCGCCATCTAATCCGTCTCCACTTCTACCCGGATTCCTACGGCGGCCTTGACCCCAAAGACGGCTCCTTTGACTTGTCCGCTTCCGGTGACCTCACCCTCCTCCGCAACTTCAGCGCTTACATAACCGCGCAAGCGCTGAGCCAAGGCTACATCGTCAGAGAATTCTTGCTGCCGCCGGCCGAAGACAGCTTCCTCGTCTTCACCTTCAAGCCATCGCGGGCAGGTGCCTTTGGCTTCGTCAATGGCATAGAGGTTTCGCCAATGCCGAACATCTTCCCGGGCGCCGCTGCCATGGTCGGCTTCAGCGATAGCTCCGTTGTCTCCGGATCCTCGGCCGTGCAGACAATGTACAGGCTGAATGTCGGCGGGCAGTACATTCCGCCGACGAACGACACGGGGCTCAGCCGGGCGTGGTATGACGACACCCCATACATCGCCGGATCGGGGGTCGGGGTGACTGCAGAGGCGGGCCCTCGCGTCAGAATTCAGTACCCCGAGAGCCTGCCCGACTACATCGCCCCGTCCAACATGTACCGGACGGCGAGGCAGATGGGGCCGGACCCGAAGGTGAACATCCAGTACAACCTCTCGTGGTCCTTCCAGATCGACCCCAACTTCACCTACATCGTTAGGCTTCATTTCTGTGAGATCCAGCTCTCCAAAGCGAACCAACGGGTGTTTGACATTTTCATAAACAACCAGACGGCGCAGAGCGGAGTGGACGTCGTCGCCATGGCTTCGTCCATGGCGGTCCCCCTGTACAAGGACTACGCCGTGTACGTCGGCGACGGTGATCAGCTGCTCGTGGAGCTCCACCCCTCGCGCGACGGCGAGCCAGAGTTCTACGACGCCATCCTGAACGGCATGGAAGCGTTCAAGCTCAGCGATTCCGGAGGCAACCTGGCCGGGCCGAACCCGGAGCCGTCAGAAAAGCTAGAGGAAGATCTGCAGGCGGCGGCGACAGTGAGGGAATTCGAATCGGAATCGGGCGGGAGGACTCACGCAATCACGAAGGCGGCAGGCGGCGTGGCAACGGCCGTCACCATCCTCTTAGCGATATGTGGCGTTGTAATTCTGAAGAACAAGAAGAGAGTTCCAGCGCAAGGGGGTTCGGCGGCGGACGGCTCCGGCTGGCTTCCGCTCCACGGGAACTCACACACCACCGGGAGCAAAAGCTGCGCGAGCAGCCACTTATCAGCGATGGCGGCGGGCCTCTGCCGCCATTTCGCGATCTCGGAAATCAAGGAGGGGACGAGGAACTTCGACGAGGTGCTGGTGATCGGCGTCGGGGGATTCGGGAAAGTGTATAAGGGGATGATCGACGGAGGTTCCACCAAAGTGGCGATCAAGAGATCGAACCCTGATTCGGAGCAGGGGATCAACGAATTCCAGACAGAGATAGAGATGCTGTCGAAGCTTCGGCACAAACACCTGGTGTCGCTCATTGGGTACTGTGAGGAGGGCGGGGAGATGTGCCTTGTGTACGACTACATGGCATACGGAACATTAAGGGAGCATCTGTACAAAACAAACAAGCCGCCTCTGCCGTGGAAGCAGAGGCTGGAGATTTGCATAGGGGCAGCCAGAGGGCTTCATTACCTGCACACAGGAGCCAAATGCACGATCATCCACAGAGACGTGAAGACCACGAACATACTCCTGGACGAGAATTGGGTGGCCAAAGTTTCGGACTTTGGGCTGTCGAAGACGGGGCCGAGCTTGAATCAATCGCACGTGAGCACGGTGGTGAAGGGGAGCTTCGGGTACCTGGACCCGGAATACTTCAGGCGCCAGCAGCTGACGGAGAAATCTGACGTTTACTCCTTCGGAGTGGTGCTCTTCGAGGTGCTGTGCGCGCGGCCGGCGCTCAACACCGCGCTGCCCAAGGATCAGGTCAGCCTCGCCGATTGGGCGCTTCAGAACCAGAGAAAAGACGCGCTTTTGGACATTGTCGATCCTCTTCTAAGAGGAAGAATCAGCCCGGAATGCCTCAGCAAGTTCGCCGGGACGGCTGAGAAGTGCCTTTCTGAGCGCGGGACCGACCGCCCGTCCATGGGAGATGTGCTCTGGAACCTTGAGTTCGCTCTGCAGCTGCAGCAGGGTTTTGAGGCTGATGATGCAGGCGCGGAGCCCTTCAATGAGCTGCTGGAGGTGTCTACCGGAGGCGAAGGAGCCGCCGATATTCAGTTCGAGCAGAGGAAATCTGATGAGATGGTCGATTCCTCCGTCTTCTCTCTTCTCGTTAACCCTAAAGGAAGATGATTTGGTTGGTTCGTTCGTCACCAGGGCGGGAGGGATTCATGTGTTTTGCATTTCAAATTTTGCTCTTTTTTTTGTTAATTTTGATTTCGATTTTCGAAGGAACGCATGTGTTCGAACTTGATTATTTGCTGTTGTTCGATTGACAAACGAGGAAGTGGACTTCGATGCAAGCTGCAATAATAATATGATCTATTTGTGTAAAAATGAAAGATTTAACTTGGAAAAAG

Network for GWHGAAEX014424

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12819.6	Malectin_like	30	396	3.30E-40
PF07714.16	Pkinase_Tyr	529	792	6.00E-50

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.020
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	0.380
	SRR5643514	five period of Gastrodia elata	0.560
	SRR5643515	five period of Gastrodia elata	0.260
	SRR5643524	five period of Gastrodia elata	0.900
	SRR5643525	five period of Gastrodia elata	0.480
	SRR5643528	five period of Gastrodia elata	0.560
	SRR5643658	five period of Gastrodia elata	0.110
	SRR5643659	five period of Gastrodia elata	0.500
	SRR5643660	five period of Gastrodia elata	0.050
	SRR5643661	five period of Gastrodia elata	0.320
	SRR5643662	five period of Gastrodia elata	1.140
	SRR5643663	five period of Gastrodia elata	0.740
	SRR5643664	five period of Gastrodia elata	1.420
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.380
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.560
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.630
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.220
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.490
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.200
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.210
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.640
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.160
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.840
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.770
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.770
SRP279888	Gastro	Gastrodia elata tuber	0.11
	Juven	Juvenile tuber	0.11
	Mother_Gastro	Mother tuber of Gastrodia elata	2.68
	Mother_Juven	Mother tuber of Juvenile	0.56