Detail information of GWHGAAEX014425/evm.TU.scaffold_59.201


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695074752|ref|XP_009384593.1|0PREDICTED: uncharacterized protein LOC103972112 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RUF7|M0RUF7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P22270_001}
TAIRAT1G732409.00E-112Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006837477373758747-
Transcript Sequence

Network for GWHGAAEX014425

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09531.9Ndc1_Nup1513497.10E-09
PF09531.9Ndc1_Nup3725002.50E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14315NDC1, TMEM48 RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.390
SRR2545915Juvenile tuber15.290
SRP108465SRR5643513five period of Gastrodia elata15.280
SRR5643514five period of Gastrodia elata17.530
SRR5643515five period of Gastrodia elata13.580
SRR5643524five period of Gastrodia elata14.950
SRR5643525five period of Gastrodia elata18.360
SRR5643528five period of Gastrodia elata12.100
SRR5643658five period of Gastrodia elata14.680
SRR5643659five period of Gastrodia elata20.140
SRR5643660five period of Gastrodia elata19.860
SRR5643661five period of Gastrodia elata20.890
SRR5643662five period of Gastrodia elata21.120
SRR5643663five period of Gastrodia elata23.100
SRR5643664five period of Gastrodia elata17.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.230
SRR6049655Rhizomagastrodiae_C368-T10_good_115.330
SRR6049656Rhizomagastrodiae_C368-T07_good_116.960
SRR6049657Rhizomagastrodiae_C368-T07_good_119.180
SRR6049658Rhizomagastrodiae_C368-T04_good_120.410
SRR6049659Rhizomagastrodiae_C368-T04_good_120.480
SRR6049660Rhizomagastrodiae_C368-T01_good_121.030
SRR6049661Rhizomagastrodiae_C368-T04_good_119.630
SRR6049662Rhizomagastrodiae_C368-T01_good_119.960
SRR6049663Rhizomagastrodiae_C368-T01_good_119.370
SRR6049664Rhizomagastrodiae_C368-T10_good_117.250
SRR6049665Rhizomagastrodiae_C368-T10_good_117.250
SRP279888GastroGastrodia elata tuber 19.00
JuvenJuvenile tuber14.89
Mother_GastroMother tuber of Gastrodia elata 11.41
Mother_JuvenMother tuber of Juvenile 9.61