Gene detail

Detail information of GWHGAAEX014433/evm.TU.scaffold_59.213

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|21673495\|ref\|NP_661560.1\|	3.00E-07	hypothetical protein CT0663 [Chlorobium tepidum TLS]
nr	gi\|743863941\|ref\|XP_010943907.1\|	0	PREDICTED: uncharacterized protein LOC105061525 [Elaeis guineensis]
trEMBL	tr\|W1PP00\|W1PP00_AMBTC	0	Uncharacterized protein {ECO:0000313\|EMBL:ERN09456.1}
TAIR	AT1G33780	1.00E-09	Protein of unknown function (DUF179)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	3956667	4027756	+

Transcript Sequence
>GWHTAAEX014433 CTCTGTGCGATTTTTCACCAGGCTTTTGAAGTAGAGCCTGCTTCCGGCGTATCCCTGCCGAATAAAACGAATTAATCGAATCGAGTCAGAAACAGAAACAGACAGACATGAGAGAGCTTTCCTCCCTTGCCACCACCGTCATCGCGTGTCTCCTTTTTTCCTGTTATCTAACGGTTATCGAATCTGCAGAGGAGAGAGGCAGCGATCGCAGCCAAAGATTGGATTGGGGATGGAAAATCCTTACAAAGCAAAATTTCTCTTCTGAGACCCGCCGTCACCCTCACATCCTACTCATGGTCACCATTCCATGGTCTGGTGAGTCACGGTCTTTGATGAAGCAGCTTAGAGAATTTGTTGCTGATCAACCAGAAAAATTTGGCCATTTAAGATTGATGGTTATTCATAAAAATTCTCAGAAACTGCTAGCAGATGTGCTTGAAGCTGCTGATGACATAACTTTGTATTATTATCATCAATCCATTTCACACAAGTACCATGGGAGTCTCTCTGCTGAAAAAATCTTGTCTTCTGTAAAGTATTTTGCGTCACATAAATCTGAAGAAGTTCCTTTGAAGCATCTGCACACCCGGAAGGAACTTAAACTTTTTTTGAAATCGACAGATAAAGCGGTTCTTTTAATTGAGTTATGTGGATGGTTAAGCAAAGTGCTGCATAAGAAAAGCAATAAAAACTTTTCTTCTCATCTGAATTTTTCAAAGACTGATGGCATACATAAATCAATCTTATTTTCAAAAGTTGATGACAAATTGCCATTGAACTTGAAGAAATACCAAAAGGGTCTGGCAAACGAAGGACCATCTTGTGTTGTTGAAAATGGGATGGATGATTCTTGTTATGCTGGAAAATTTAGTTGGGAAAACAGCAGTGTCCGGGGGGAAGAAGGGAGATATGAAGCTGCAGATATAAATTTGTCATGTACAGAAGAGCGGTTTGAACAATTTAAATCTCTCTTTTCGAAGTTCAAAATGTTAGCAAGAGAGTTTTTCCTGCCTCCTGAAAGGATAAGATTTGGGTTGATATCTGAAAGATCGATGCTGCCCTATGTGGGTGTTGACACCATGGGCGCATGGCTAGTAATGCTTCAGTTCAATGGATGCCCTAGTTGTTCAGTAACACTTACAGAAGGTGATGATCTCAGAAAGTTCTTGCAAGAGCACCACTCTCCAGTCATGCAGCTGGATGTCAAACACAATCTTGAGCCAGCATTTCCTGCAAACAGGCCTTCACTCGTTCTCTTTATTGATAGACAATCTGATTCTCAAGTGATCAGAGAAAAGAGCAAGTCAGCACTTGATGCATTTAGGATGCTGGCATTGAATTTTCAGCCGTCTTACAAAAGGAAGATAGGGGCACACCGTGTATTTTCTCAGAGTTCAACGGTCCAAATTGTTTCTGAAAGACAAAGCACTGCTGTTTCAGATTCATCTCATCTCTATTTTTCAAAGGATCAGCGAGTCCCTAAGTTAGTTAAAGTCAAAGATAATGTGGCTATTATCCTTAACGAAGGTCAAGGCATTTTGTCAGATAAAACTGCATCTTATGCTCACGGTAATACAGTATATGATGCATTATTAAATTTTATTAACAAAAGAAGTCTCGACAGAAAACAAAGGACTAAATTAAGTTTGTTAGCAAAGGAAAATGGTTTCCAGCTGTTGTCAGATGATTTTGAAGTTCAGGTTATAGATTCATTGTCGTATTACAAGGAAACCAATCATTTGAGTGATGTAAATAAACATGCAGGAATGAATTTAGGAGATAAAACTTTCAAGCTTCACCATCAATCAAATGAGAAAAAAAATGATAATTTACTAGCTGCTATTGAAGTGCCAGTAGATGATGCTAAGCAAGCTGCACATGGGGATACTGAAGATGACATTAAAAAATTCTTTGAAACCAACACTGAGAACAAAAGAAGCTCCAATAAGCTTGGCATTGTGCAAGCCCGAGATACCAAGAACGCTTTTGGTGATTTCTTAGACTCTTTAATCAATGAAGATGATAAGCGCTGCAGACAAAATGATTTTGAATCATCAATAAATCATGATGAAAACTCTGTGCCAGAACTAGAAGTGCCTTTTGTAGGGACATGTATGGAGAAAGGTAGTGCTGATGATGTTGATTGCATCTCAAGCTCAATTGGAGCTGCTGAAGAAGTGCCATTTGTTGACCCTGAAGGAGATTTCAGTTCAAATAATGAGGCTGAGATTGAAAAAAATGGGACGAGCAAGTCAAGTGATGGAAATATTCAACATCAACCTTTTTGGGGTTCCTTTTTCTTTATTGATGGTGCATATCGACTTTTGAATTCACTTAGTGGCAATTTAAATATTCCATCTCTGGTTTTACTTGATCCTGTAGAGCAGCATCACTTTGTCTTTAATGAAGATAGAGACATTGATTATTCTTCGATGTTTAATTTTGTGAAGAAATTTTTGGACAGAAGTCTTTCTCCATATCAGCCTTCATCATCCTCTATAATGAATGTTAAGGAGCCCCCACGACCACCATTTGTGAACCTGAACTTCCATGAGGCTGACGCCATACCTCGAGTGACAACTAGCACATTCTGTGAAATGGTTTTTGGTTTTAACCCATGTGTTACTGAAAATGCATTTCCAACCTCTCAAGTGCAAAATTTAGGGGCTGCATGGAAGACAGACGTTTTAGTTCTTTTTGGTTCATCTTGGTGTGGATTTTGCTTAAGGATGGAGCTGCTTGTACGTGAAGTCTATCGAGCTTTTAAGAGCTTGAAGAATATGCTGAAATGTGAATCTAGTTTCATCAATCCAGTATGCTTTCATGATGATGGAGGCAATGTGGTCGAATATCGTTTACCCTCTGTTTTCTTGATGGACTGTTCAAAAAATGACTGTGGGTTCTTCCTCAAGCATTTGGGAAGGAATGAGTTATACCCTGAGCTATTATTATACTCTGCACTGAACAAAAGTGCTGTTACTTATGAAGGCGATATGCTGGTGGCTAACATAATCAAATTTGTAGCATCTCAAGGAAGAAGTTCTCAGTTCTTGAACAAGTACAGAGGTTATTTGTGGAAGCAGCCATTGAGCAATTATGCTAACAAGAGAGAACCGGCGCTGTACGCCAAACCTCCACTTCAATTCATCGAGGTGGATCTGCAGCCGCAGCTAGCGTCGGTTGATGATAGAAAATCCGCCGCAGAATCGCAGTCACCAAACACCTCCGGAGGCCGTCGCGTCGTAGTTCAAGGATCCGTTCTGTCCGCCACGGACAAGCTCCGAGGAGCCGCCCCGTTCGACGGCGCCGTCATCCTCATCACTCTCATAGAAGAAGGAGATGCTTTCCATGGCGTCATCCTGAACAAGCCGATGAAATGGAGCATTTTTGAGAATCTGGGCGACGATATGGATGCCCTAGAGCAGGCTCCTCTCTCGTACGGGGGGCCGATCAGGGCGCCTTTGGTCGGCCTCCCTCTCGTCAGTCTGGCCAGGAAGCCGACGGATGGGTACGCCAAAGTGGTTCCTGGTGTTTATTTCGGCAGTCCGGCGATCACGAGCATGGTGATCAAAGGGATCAAGTCCGGCGACCAGTCCTGTCATGATTACTGGTTCTTCTTTGGTTATTCGGGCTGGAAATGGGATCAGCTTTTTGATGAGCTTGATGAAGGAGCTTGGGATTTGAGAGATGATCCCATTGGAATCCTGAACTGGCCGAACATCTGACTTGATTAATGCTTTATTTATTCACTGGGATCTGTTTATTTTTAAATTTAAATGTGTCAATTGTAACGACTTTTTTATATTAAAAATTAAGGTATATGAAATTAAAAGTATAACAATAAGACTTATGGATAGAATCAATAGATGCATGTGCGTCTCTCCTACGTTATTACAGCTTCATACATGGGTCATCCAGTATTGTCTAAATTTACAGTTTTATGGGCTGATCTAATGTGTTTTAAAAAGCATAAACTAAGCGAATTGCGATTAAGCGGCAGGAGGCTGGAGAAGAAGACGGATTCGGCAGAGGAGATGATGGAGAGTGCTTTATTGGCTGAGGGAGAAAGGGATGAGGTAAAGGAAATAGAATCTTCATCGGAAGCAAGGGGCTGAGGCGGCTTCTTCTTCGGCTGCCATTATCGAGAGGCGCAGGATTAGGGTTCGACGGAGCAGGCAATGGCTGCAGCGAGCAAAAGGAGAGAGTATTTGGTATTAGGTATTAAGAGAAAGTGCTTTTAACCTTGTAAATAAAAATATTCTCGTTTGTTGTCTTTTAATTTTATTTTAATCATAAATAGTTTACTTTTCAAAAACCTAATAAAAATAAGAAATTATCTCCCAAAATTTCTTGAACCTAATCAGAACGAAGTCGCTTCTTTCCTTAGCCGCTCGCATGAGGCATTTTCAACTTTTCCATTCTTTCGCCCTTTCTTCAACTGCTCTTGTTCTGTGAAGAATGCCTTTCCACACAATAATTTGGAGATTGAGGCATTGAGATGAACCATGAAATATTGCACAATAATTTGGAGATGAGGCATTGAGATGAAAGCTTGACATTCCAAACTGCGTAGAGAGCTCTGAATCTGCTCATCCATGATCCATAATAAGTGCTATATGCTGTTAAGGT

Network for GWHGAAEX014433

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02622.14	DUF179	1063	1191	2.70E-13

Protein Sequence

>GWHPAAEX014433
MRELSSLATTVIACLLFSCYLTVIESAEERGSDRSQRLDWGWKILTKQNFSSETRRHPHILLMVTIPWSGESRSLMKQLREFVADQPEKFGHLRLMVIHKNSQKLLADVLEAADDITLYYYHQSISHKYHGSLSAEKILSSVKYFASHKSEEVPLKHLHTRKELKLFLKSTDKAVLLIELCGWLSKVLHKKSNKNFSSHLNFSKTDGIHKSILFSKVDDKLPLNLKKYQKGLANEGPSCVVENGMDDSCYAGKFSWENSSVRGEEGRYEAADINLSCTEERFEQFKSLFSKFKMLAREFFLPPERIRFGLISERSMLPYVGVDTMGAWLVMLQFNGCPSCSVTLTEGDDLRKFLQEHHSPVMQLDVKHNLEPAFPANRPSLVLFIDRQSDSQVIREKSKSALDAFRMLALNFQPSYKRKIGAHRVFSQSSTVQIVSERQSTAVSDSSHLYFSKDQRVPKLVKVKDNVAIILNEGQGILSDKTASYAHGNTVYDALLNFINKRSLDRKQRTKLSLLAKENGFQLLSDDFEVQVIDSLSYYKETNHLSDVNKHAGMNLGDKTFKLHHQSNEKKNDNLLAAIEVPVDDAKQAAHGDTEDDIKKFFETNTENKRSSNKLGIVQARDTKNAFGDFLDSLINEDDKRCRQNDFESSINHDENSVPELEVPFVGTCMEKGSADDVDCISSSIGAAEEVPFVDPEGDFSSNNEAEIEKNGTSKSSDGNIQHQPFWGSFFFIDGAYRLLNSLSGNLNIPSLVLLDPVEQHHFVFNEDRDIDYSSMFNFVKKFLDRSLSPYQPSSSSIMNVKEPPRPPFVNLNFHEADAIPRVTTSTFCEMVFGFNPCVTENAFPTSQVQNLGAAWKTDVLVLFGSSWCGFCLRMELLVREVYRAFKSLKNMLKCESSFINPVCFHDDGGNVVEYRLPSVFLMDCSKNDCGFFLKHLGRNELYPELLLYSALNKSAVTYEGDMLVANIIKFVASQGRSSQFLNKYRGYLWKQPLSNYANKREPALYAKPPLQFIEVDLQPQLASVDDRKSAAESQSPNTSGGRRVVVQGSVLSATDKLRGAAPFDGAVILITLIEEGDAFHGVILNKPMKWSIFENLGDDMDALEQAPLSYGGPIRAPLVGLPLVSLARKPTDGYAKVVPGVYFGSPAITSMVIKGIKSGDQSCHDYWFFFGYSGWKWDQLFDELDEGAWDLRDDPIGILNWPNI

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.500
SRP064423	SRR2545915	Juvenile tuber	10.750
SRP108465	SRR5643513	five period of Gastrodia elata	8.420
	SRR5643514	five period of Gastrodia elata	8.340
	SRR5643515	five period of Gastrodia elata	9.190
	SRR5643524	five period of Gastrodia elata	9.570
	SRR5643525	five period of Gastrodia elata	10.140
	SRR5643528	five period of Gastrodia elata	8.870
	SRR5643658	five period of Gastrodia elata	11.540
	SRR5643659	five period of Gastrodia elata	7.250
	SRR5643660	five period of Gastrodia elata	7.360
	SRR5643661	five period of Gastrodia elata	7.150
	SRR5643662	five period of Gastrodia elata	6.200
	SRR5643663	five period of Gastrodia elata	6.330
	SRR5643664	five period of Gastrodia elata	6.190
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.580
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.790
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.070
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.780
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	8.700
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.350
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.150
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.130
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.160
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.300
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.130
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.130
SRP279888	Gastro	Gastrodia elata tuber	7.77
	Juven	Juvenile tuber	14.92
	Mother_Gastro	Mother tuber of Gastrodia elata	12.39
	Mother_Juven	Mother tuber of Juvenile	13.30