Detail information of GWHGAAEX014434/evm.TU.scaffold_59.214


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28503.00E-26Predicted peptidoglycan-binding protein, contains LysM domain
nrgi|672184095|ref|XP_008812348.1|5.11E-74PREDICTED: uncharacterized protein LOC103723258 [Phoenix dactylifera]
Swissprottr|Q9FZ32|FB60_ARATH1.00E-07F-box protein At1g55000
trEMBLtr|M0RNK4|M0RNK4_MUSAM6.00E-62Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P01740_001}
TAIRAT5G08200_13.00E-26Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006840299724045422+
Transcript Sequence

Network for GWHGAAEX014434

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01476.19LysM591021.60E-05
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.960
SRR2545915Juvenile tuber15.710
SRP108465SRR5643513five period of Gastrodia elata20.800
SRR5643514five period of Gastrodia elata29.090
SRR5643515five period of Gastrodia elata27.320
SRR5643524five period of Gastrodia elata23.470
SRR5643525five period of Gastrodia elata51.600
SRR5643528five period of Gastrodia elata51.880
SRR5643658five period of Gastrodia elata55.010
SRR5643659five period of Gastrodia elata27.350
SRR5643660five period of Gastrodia elata24.600
SRR5643661five period of Gastrodia elata28.420
SRR5643662five period of Gastrodia elata33.360
SRR5643663five period of Gastrodia elata30.030
SRR5643664five period of Gastrodia elata33.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.380
SRR6049655Rhizomagastrodiae_C368-T10_good_123.590
SRR6049656Rhizomagastrodiae_C368-T07_good_123.840
SRR6049657Rhizomagastrodiae_C368-T07_good_119.270
SRR6049658Rhizomagastrodiae_C368-T04_good_123.620
SRR6049659Rhizomagastrodiae_C368-T04_good_122.370
SRR6049660Rhizomagastrodiae_C368-T01_good_120.750
SRR6049661Rhizomagastrodiae_C368-T04_good_123.310
SRR6049662Rhizomagastrodiae_C368-T01_good_124.790
SRR6049663Rhizomagastrodiae_C368-T01_good_123.730
SRR6049664Rhizomagastrodiae_C368-T10_good_128.000
SRR6049665Rhizomagastrodiae_C368-T10_good_128.000
SRP279888GastroGastrodia elata tuber 30.78
JuvenJuvenile tuber26.09
Mother_GastroMother tuber of Gastrodia elata 46.80
Mother_JuvenMother tuber of Juvenile 29.87