Detail information of GWHGAAEX014436/evm.TU.scaffold_59.216


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26112.00E-155Neurochondrin/leucine-rich protein (Neurochondrin)
nrgi|672188091|ref|XP_008813496.1|0PREDICTED: uncharacterized protein LOC103724114 [Phoenix dactylifera]
trEMBLtr|M0SBR8|M0SBR8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P04500_001}
TAIRAT4G320502.00E-155neurochondrin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006840759234126975+
Transcript Sequence

Network for GWHGAAEX014436

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05536.10Neurochondrin55731.50E-98
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.170
SRR2545915Juvenile tuber27.320
SRP108465SRR5643513five period of Gastrodia elata12.330
SRR5643514five period of Gastrodia elata13.510
SRR5643515five period of Gastrodia elata12.830
SRR5643524five period of Gastrodia elata12.750
SRR5643525five period of Gastrodia elata14.190
SRR5643528five period of Gastrodia elata13.460
SRR5643658five period of Gastrodia elata16.830
SRR5643659five period of Gastrodia elata13.910
SRR5643660five period of Gastrodia elata17.250
SRR5643661five period of Gastrodia elata13.670
SRR5643662five period of Gastrodia elata14.310
SRR5643663five period of Gastrodia elata15.030
SRR5643664five period of Gastrodia elata19.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.750
SRR6049655Rhizomagastrodiae_C368-T10_good_118.350
SRR6049656Rhizomagastrodiae_C368-T07_good_117.880
SRR6049657Rhizomagastrodiae_C368-T07_good_124.030
SRR6049658Rhizomagastrodiae_C368-T04_good_121.460
SRR6049659Rhizomagastrodiae_C368-T04_good_131.790
SRR6049660Rhizomagastrodiae_C368-T01_good_125.260
SRR6049661Rhizomagastrodiae_C368-T04_good_124.300
SRR6049662Rhizomagastrodiae_C368-T01_good_115.310
SRR6049663Rhizomagastrodiae_C368-T01_good_118.250
SRR6049664Rhizomagastrodiae_C368-T10_good_113.460
SRR6049665Rhizomagastrodiae_C368-T10_good_113.460
SRP279888GastroGastrodia elata tuber 21.60
JuvenJuvenile tuber22.87
Mother_GastroMother tuber of Gastrodia elata 12.01
Mother_JuvenMother tuber of Juvenile 16.31