Detail information of GWHGAAEX014439/evm.TU.scaffold_59.219


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|289596964|ref|YP_003483660.1|2.00E-36isochorismatase hydrolase [Aciduliprofundum boonei T469]
nrgi|695050291|ref|XP_009413122.1|1.54E-108PREDICTED: uncharacterized protein LOC103994495 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FMX7|NIC2_ARATH5.00E-86Nicotinamidase 2 {ECO:0000305}
trEMBLtr|M0TQA4|M0TQA4_MUSAM1.00E-108Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P14010_001}
TAIRAT5G232302.00E-85nicotinamidase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006841514904153408-
Transcript Sequence

Network for GWHGAAEX014439

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00857.19Isochorismatase241871.30E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.420
SRR2545915Juvenile tuber12.020
SRP108465SRR5643513five period of Gastrodia elata17.190
SRR5643514five period of Gastrodia elata16.860
SRR5643515five period of Gastrodia elata17.370
SRR5643524five period of Gastrodia elata15.140
SRR5643525five period of Gastrodia elata23.180
SRR5643528five period of Gastrodia elata13.700
SRR5643658five period of Gastrodia elata62.240
SRR5643659five period of Gastrodia elata13.970
SRR5643660five period of Gastrodia elata14.810
SRR5643661five period of Gastrodia elata15.560
SRR5643662five period of Gastrodia elata17.300
SRR5643663five period of Gastrodia elata16.090
SRR5643664five period of Gastrodia elata15.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.710
SRR6049655Rhizomagastrodiae_C368-T10_good_141.920
SRR6049656Rhizomagastrodiae_C368-T07_good_119.790
SRR6049657Rhizomagastrodiae_C368-T07_good_121.450
SRR6049658Rhizomagastrodiae_C368-T04_good_114.020
SRR6049659Rhizomagastrodiae_C368-T04_good_114.100
SRR6049660Rhizomagastrodiae_C368-T01_good_118.970
SRR6049661Rhizomagastrodiae_C368-T04_good_117.250
SRR6049662Rhizomagastrodiae_C368-T01_good_119.750
SRR6049663Rhizomagastrodiae_C368-T01_good_118.330
SRR6049664Rhizomagastrodiae_C368-T10_good_121.890
SRR6049665Rhizomagastrodiae_C368-T10_good_121.890
SRP279888GastroGastrodia elata tuber 14.90
JuvenJuvenile tuber13.55
Mother_GastroMother tuber of Gastrodia elata 7.88
Mother_JuvenMother tuber of Juvenile 8.06