Detail information of GWHGAAEX014442/evm.TU.scaffold_59.222
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|269928661|ref|YP_003320982.1| | 2.00E-129 | Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase [Sphaerobacter thermophilus DSM 20745] |
| KOG | KOG0805 | 8.00E-179 | Carbon-nitrogen hydrolase |
| nr | gi|743776009|ref|XP_010918400.1| | 0 | PREDICTED: bifunctional nitrilase/nitrile hydratase NIT4B-like [Elaeis guineensis] |
| Swissprot | tr|Q6H849|NRL4_ORYSJ | 0 | Bifunctional nitrilase/nitrile hydratase NIT4 |
| trEMBL | tr|M0TQA0|M0TQA0_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P13970_001} |
| TAIR | AT5G22300 | 8.00E-179 | nitrilase 4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000068 | 4161500 | 4184689 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014442
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00795.21 | CN_hydrolase | 14 | 287 | 2.00E-67 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13035 | NIT4 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Cyanoamino acid metabolism | map00460 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006807 | Biological Process | nitrogen compound metabolic process |
| GO:0016810 | Molecular Function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 49.440 |
| SRR2545915 | Juvenile tuber | 63.050 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 93.210 |
| SRR5643514 | five period of Gastrodia elata | 116.600 | |
| SRR5643515 | five period of Gastrodia elata | 91.020 | |
| SRR5643524 | five period of Gastrodia elata | 107.330 | |
| SRR5643525 | five period of Gastrodia elata | 99.420 | |
| SRR5643528 | five period of Gastrodia elata | 85.320 | |
| SRR5643658 | five period of Gastrodia elata | 85.960 | |
| SRR5643659 | five period of Gastrodia elata | 80.380 | |
| SRR5643660 | five period of Gastrodia elata | 85.300 | |
| SRR5643661 | five period of Gastrodia elata | 87.160 | |
| SRR5643662 | five period of Gastrodia elata | 78.960 | |
| SRR5643663 | five period of Gastrodia elata | 81.100 | |
| SRR5643664 | five period of Gastrodia elata | 89.770 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 119.810 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 109.800 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 108.890 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 116.930 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 137.900 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 143.440 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 122.550 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 128.610 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 110.540 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 116.450 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 119.470 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 119.470 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 79.23 |
| Juven | Juvenile tuber | 95.00 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 61.58 | |
| Mother_Juven | Mother tuber of Juvenile | 61.63 |