Detail information of GWHGAAEX014451/evm.TU.scaffold_59.231
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|254000464|ref|YP_003052527.1| | 3.00E-14 | sucrose-phosphate synthase [Methylovorus glucosetrophus SIP3-4] |
| KOG | KOG0853 | 9.00E-107 | Glycosyltransferase |
| nr | gi|743806522|ref|XP_010927691.1| | 8.43E-121 | PREDICTED: probable sucrose-phosphate synthase 2 [Elaeis guineensis] |
| Swissprot | tr|Q8RY24|SPSA3_ARATH | 3.00E-107 | Probable sucrose-phosphate synthase 3 |
| trEMBL | tr|M0SPC1|M0SPC1_MUSAM | 7.00E-119 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P16070_001} |
| TAIR | AT1G04920 | 9.00E-107 | sucrose phosphate synthase 3F |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000068 | 4299921 | 4301705 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014451
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF08550.9 | DUF1752 | 84 | 96 | 0.0002 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00696 | E2.4.1.14 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Starch and sucrose metabolism | map00500 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.620 |
| SRR5643514 | five period of Gastrodia elata | 0.280 | |
| SRR5643515 | five period of Gastrodia elata | 0.230 | |
| SRR5643524 | five period of Gastrodia elata | 0.310 | |
| SRR5643525 | five period of Gastrodia elata | 0.000 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 0.570 | |
| SRR5643659 | five period of Gastrodia elata | 0.400 | |
| SRR5643660 | five period of Gastrodia elata | 0.220 | |
| SRR5643661 | five period of Gastrodia elata | 0.560 | |
| SRR5643662 | five period of Gastrodia elata | 0.110 | |
| SRR5643663 | five period of Gastrodia elata | 0.250 | |
| SRR5643664 | five period of Gastrodia elata | 0.100 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.000 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.100 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.090 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.150 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.150 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.00 |
| Juven | Juvenile tuber | 0.17 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.00 | |
| Mother_Juven | Mother tuber of Juvenile | 0.12 |