Detail information of GWHGAAEX014458/evm.TU.scaffold_59.241


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13033.00E-87Amino acid transporters
nrgi|672165393|ref|XP_008802597.1|2.37E-113PREDICTED: vacuolar amino acid transporter 1-like isoform X1 [Phoenix dactylifera]
Swissprottr|O22719|LHTL3_ARATH3.00E-07Lysine histidine transporter-like 3
trEMBLtr|V4TJX9|V4TJX9_9ROSI1.00E-110Uncharacterized protein {ECO:0000313|EMBL:ESR51935.1}
TAIRAT5G152403.00E-87Transmembrane amino acid transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006844923294495153-
Transcript Sequence

Network for GWHGAAEX014458

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans13594.10E-53
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15015SLC32A, VGAT GABAergic synapse map04727
Retrograde endocannabinoid signalingmap04723
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.070
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.410
SRR5643514five period of Gastrodia elata6.970
SRR5643515five period of Gastrodia elata1.610
SRR5643524five period of Gastrodia elata4.170
SRR5643525five period of Gastrodia elata0.880
SRR5643528five period of Gastrodia elata0.350
SRR5643658five period of Gastrodia elata0.370
SRR5643659five period of Gastrodia elata0.230
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.170
SRR6049655Rhizomagastrodiae_C368-T10_good_11.660
SRR6049656Rhizomagastrodiae_C368-T07_good_12.640
SRR6049657Rhizomagastrodiae_C368-T07_good_10.730
SRR6049658Rhizomagastrodiae_C368-T04_good_15.090
SRR6049659Rhizomagastrodiae_C368-T04_good_13.240
SRR6049660Rhizomagastrodiae_C368-T01_good_10.560
SRR6049661Rhizomagastrodiae_C368-T04_good_11.500
SRR6049662Rhizomagastrodiae_C368-T01_good_11.740
SRR6049663Rhizomagastrodiae_C368-T01_good_11.710
SRR6049664Rhizomagastrodiae_C368-T10_good_16.950
SRR6049665Rhizomagastrodiae_C368-T10_good_16.950
SRP279888GastroGastrodia elata tuber 0.23
JuvenJuvenile tuber0.16
Mother_GastroMother tuber of Gastrodia elata 2.21
Mother_JuvenMother tuber of Juvenile 0.25