Detail information of GWHGAAEX014465/evm.TU.scaffold_59.248
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|325109452|ref|YP_004270520.1| | 0 | Tripeptidyl-peptidase II [Planctomyces brasiliensis DSM 5305] |
| KOG | KOG1114 | 0 | Tripeptidyl peptidase II |
| nr | gi|743776280|ref|XP_010918543.1| | 0 | PREDICTED: tripeptidyl-peptidase 2 [Elaeis guineensis] |
| Swissprot | tr|Q6ESI7|TPPII_ORYSJ | 0 | Tripeptidyl-peptidase 2 |
| trEMBL | tr|M0RP78|M0RP78_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P03980_001} |
| TAIR | AT4G20850 | 0 | tripeptidyl peptidase ii |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000068 | 4623547 | 4723650 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014465
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00082.21 | Peptidase_S8 | 116 | 584 | 4.90E-80 |
| PF12580.7 | TPPII | 878 | 1063 | 1.60E-58 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0008240 | Molecular Function | tripeptidyl-peptidase activity |
| GO:0004252 | Molecular Function | serine-type endopeptidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 95.200 |
| SRR2545915 | Juvenile tuber | 127.230 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 52.120 |
| SRR5643514 | five period of Gastrodia elata | 58.550 | |
| SRR5643515 | five period of Gastrodia elata | 48.710 | |
| SRR5643524 | five period of Gastrodia elata | 57.890 | |
| SRR5643525 | five period of Gastrodia elata | 26.190 | |
| SRR5643528 | five period of Gastrodia elata | 26.700 | |
| SRR5643658 | five period of Gastrodia elata | 28.210 | |
| SRR5643659 | five period of Gastrodia elata | 66.490 | |
| SRR5643660 | five period of Gastrodia elata | 73.610 | |
| SRR5643661 | five period of Gastrodia elata | 68.240 | |
| SRR5643662 | five period of Gastrodia elata | 63.650 | |
| SRR5643663 | five period of Gastrodia elata | 68.840 | |
| SRR5643664 | five period of Gastrodia elata | 64.830 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 69.360 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 63.660 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 64.970 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 71.320 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 71.270 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 78.150 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 65.240 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 71.860 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 60.410 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 64.790 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 60.780 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 60.780 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 64.57 |
| Juven | Juvenile tuber | 65.31 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 41.12 | |
| Mother_Juven | Mother tuber of Juvenile | 50.03 |