Gene detail

Detail information of GWHGAAEX014471/evm.TU.scaffold_59.254

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|720080204\|ref\|XP_010241906.1\|	0	PREDICTED: uncharacterized protein LOC104586387 isoform X2 [Nelumbo nucifera]
trEMBL	tr\|M0SXW4\|M0SXW4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P12350_001}
trEMBL	tr\|M0SXW4\|M0SXW4_MUSAM	2.00E-07	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P12350_001}
TAIR	AT5G23890	2.00E-170	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	4838943	4844995	-

Transcript Sequence
>GWHTAAEX014471 ATGATGTTTGCGGATGCCGAACCTTATCTTCAGGTGTCTTCTCTGAGCCCTAAAATTCTGGCGATTCTGAGAGTGAGCTATCCTCCACAGAAGAAAATGGCGTCGATAGGCTGCTCCTCGTCTCCCGGACCGCTCCAGGTGCGTCCTGTTCATCGGTGTCGCGAGCATTCTTCCTCCTTTTCGAGGATCCGATTCAGATTATCCCAACGCTGCATCGTTCTCGCCTCGTCTTCCCGAGGGAGCAATAATGATGGAAGGGAAGAACATGCATGGAGCAGCAGCAGGTTTCCTGACGCTTTTTCTGGATGGTATGGGTTGGAGAATGAAGGTGGGGGGAATTTTCAGGGAAAGGATGAGCACGGAGGGATGCTTGGAGCAGGGCTTGCCGGATTATTACTTGTTGGAGGTCTCACCTTTGCTACATTGTCCCTACACAACAAAACCTGCAGAAATATTTCTGCAGTCAAACAAAACATAAAGCCCTTACCTACTGAGCAAATAGTTTTGTCAACCTCTGAAGATCAAAGTGAAGAAATTGCTCAGGTTGAAGATGAGATCAGTTCATTATCATCCAACAATGAGAATGGGATAAACGGCCATAATCCTGATTCTGCTACAGATTATGTCTCTGATAAACAATTTGTCAATTCAAAAGACCACCCGGATGTATCGATTGAAGATGACCACTCTGTTCCCGGCCAGCCATATAGTTTAACTGGTACAGTTGAATCAGCAACCTATTATGCTGATTCTCAATCCATTCCTGATGGTATATCGGATAGTGCTGCTTTTGTTTCAAAAGGAGATGACCAACATGATAATGGCTTACTGCAGCTTTCACCTGAAGGTGTTACAAAATGGAGAGTGGAATATTCTGGTATTTGTTCTGGTTCAAACTTTGGTGATACATACATGGGCTCTTCAGACTTGATCAATACTGAAGAACGATTTTACTCATTAGATGAAATAAACTCTATAGAACATTCTGATCTAGTACATGGCCATGATCTCTCAGGAAATGAATCTAACATAAGTAGTGGTTATAATCGAAATAACAAAAAGTATATATTTGAGTCAACTCTTCCAATGGAATTGTTTGCTTCTTCAGGGGCACCTGCTCCATCTCTCGTCTCTTCAGCAATGGAGGTGCTTCCTGGAATGGTTCTTGTTCCTGCAGTTGTTGATCAGATTCAGTGTCAGACATTCACAGCCTTGCAAGCTCTGAAGGTGATTGAGGCTGATGCCCAGCCAGGAGATCTATGCACTCGTCGAGAGTATGCTCGTTGGCTTGTCTCTGCAAGCAATGCACTATCGAGGAAACCATATACGAAGCTGTATCCAGCAATGTATATAGAGAATATCACTGAGCGTGCTTTTGATGATGTTAGTGCCGAAGACCCAGATTTCTCGTACATCCAAGGCTTAGCAGAGGCAGGAATAATATCTAGCAAGCTCTCCTTTTCCGAAACGAGTGGCAGAGGCTTGTCTTCTACTTGGAATCGAGAACCGCATCTCTTCTTTCCGGAAAGCCCTGTATCAAGGCAAGATCTTGTGAGCTGGAAGATGGTAATGGACAAAAAACTTCTACCTGCGGCAGACAGAGACCGTCTTTACCAGATATCCGGCTTCATGGACGTTGAGAAAATAGACCCGGGAGCATATCCGGCACTCGTAGCAGACATGACTTCAGGAGAACATGGCATCATCTCTCCCGCCTTTGGGTACACAAGGCTATTCCAGCCTAGCAAACCGGTCACAAAGGTGCAGGCTGCTGTCGCTCTCGCCGCTGGTGAAGCGAGCGAGATTGTCGCAGAGGAACTGGCACGAATCTTGGCGGAATCCTTTGCGGAAGCTGTTGTGAATGATCACACGGCTTTGGTTGCGCATGTCGAGAACGAGCTCAATGCCAGCTTTGAGCAGGAGCTTGCTAGGGAGAGAGAGAGAGCAAGTGCAGTGGAGAAGCTGGCGGAGGAAGCGAGAGCGGAGCTGGAAAGAATACGGGCTGAGAGAGAGGCTGAAGATGACGCCCTCCTCAGAGAAAAGTTTGACCTGAAATCTGAGATAGAGGTTATTTCGAGGCTAAGGTCCGAAACAGAAGTGCAGCTGCAAGAGCTAGCAAGCAGCAGGGAAGAAGTAGCTTTGGAGCGTGAAAGGATCAGTAAGCTGAGAAAGGAAACCAAGAGCGAAAGGGGATCGGTTGCTCGGCTGCAGTATGAGCTGGAAGTCGAACGGAAGGCTCTGTCCATGGCCAGGAAATGGGCAGAAGAGGAAGCTAAGAGAGCTAGGAAGCTGGGGAGGGCGCTGGAGGAGGCGAGGGATGCGTGGATTAAGCACGGGATCAAAATCGTCGTTGAAGGAGACCTGCAACGGGATACCGCCGCCGCTGGAAGAATCAAATGGGTTGAAGGAGATGCAAAGCCGCAGCAGCTGCTCAATGATGGAGCTGTCAGCAGAGGGAAGAATTTAGTCCAGAAATTGAAGGGGATGATGGCCTCCGAAATGAAATTCAGGCCGTCCTCCGGCATTCCAGGCATAATTCGTGCTGCTGGCCGCTTCGTTTCGGCTCTCGAGAAGCTCGCTTTCGACGGAGCGAAGAAGAGGATGGCGGCGGCGATCGCCCGCCTGAAGGCTGCTGCAGACAATGCGAGGAAGGCACTTTACAACGTTTCTCAGAAATTTACTTCTAATTAGTTTATGAAAGTTTTGATGTTTTTGCTTCATTGTACTTTTTATCAATTTATATACTCCCCAACTTTTCAGTAATTAATGCTTGAAACTTCATTTCACTTATTTGAGCCCCGTCTATTTTATATAATGTTGATAGAAATATTATTAGAAATGCT

Network for GWHGAAEX014471

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	88.370
SRP064423	SRR2545915	Juvenile tuber	71.100
SRP108465	SRR5643513	five period of Gastrodia elata	54.020
	SRR5643514	five period of Gastrodia elata	48.030
	SRR5643515	five period of Gastrodia elata	42.830
	SRR5643524	five period of Gastrodia elata	38.050
	SRR5643525	five period of Gastrodia elata	55.900
	SRR5643528	five period of Gastrodia elata	39.550
	SRR5643658	five period of Gastrodia elata	50.950
	SRR5643659	five period of Gastrodia elata	64.940
	SRR5643660	five period of Gastrodia elata	74.690
	SRR5643661	five period of Gastrodia elata	65.390
	SRR5643662	five period of Gastrodia elata	86.040
	SRR5643663	five period of Gastrodia elata	88.290
	SRR5643664	five period of Gastrodia elata	97.050
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	74.730
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	72.240
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	62.720
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	86.550
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	62.470
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	62.350
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	65.630
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	57.050
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	46.450
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	44.430
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	53.260
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	53.260
SRP279888	Gastro	Gastrodia elata tuber	99.66
	Juven	Juvenile tuber	58.26
	Mother_Gastro	Mother tuber of Gastrodia elata	32.50
	Mother_Juven	Mother tuber of Juvenile	29.39