Detail information of GWHGAAEX014475/evm.TU.scaffold_59.258


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218779469|ref|YP_002430787.1|5.00E-52peptidase S10 serine carboxypeptidase [Desulfatibacillum alkenivorans AK-01]
KOGKOG12820Serine carboxypeptidases (lysosomal cathepsin A)
nrgi|743776417|ref|XP_010918615.1|0PREDICTED: serine carboxypeptidase-like [Elaeis guineensis]
Swissprottr|P37891|CBP3_ORYSJ0Serine carboxypeptidase 3 (Precursor)
trEMBLtr|M0RNM5|M0RNM5_MUSAM0Carboxypeptidase {ECO:0000256|RuleBase:RU361156}
TAIRAT3G104100SERINE CARBOXYPEPTIDASE-LIKE 49

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006848877574894772-
Transcript Sequence

Network for GWHGAAEX014475

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00450.21Peptidase_S10794752.00E-123
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004185Molecular Functionserine-type carboxypeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.120
SRR2545915Juvenile tuber0.360
SRP108465SRR5643513five period of Gastrodia elata2.040
SRR5643514five period of Gastrodia elata1.240
SRR5643515five period of Gastrodia elata1.360
SRR5643524five period of Gastrodia elata1.250
SRR5643525five period of Gastrodia elata1.440
SRR5643528five period of Gastrodia elata1.680
SRR5643658five period of Gastrodia elata2.180
SRR5643659five period of Gastrodia elata0.380
SRR5643660five period of Gastrodia elata0.150
SRR5643661five period of Gastrodia elata0.260
SRR5643662five period of Gastrodia elata0.110
SRR5643663five period of Gastrodia elata0.060
SRR5643664five period of Gastrodia elata0.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.780
SRR6049655Rhizomagastrodiae_C368-T10_good_10.650
SRR6049656Rhizomagastrodiae_C368-T07_good_11.520
SRR6049657Rhizomagastrodiae_C368-T07_good_10.460
SRR6049658Rhizomagastrodiae_C368-T04_good_10.140
SRR6049659Rhizomagastrodiae_C368-T04_good_10.200
SRR6049660Rhizomagastrodiae_C368-T01_good_10.750
SRR6049661Rhizomagastrodiae_C368-T04_good_10.480
SRR6049662Rhizomagastrodiae_C368-T01_good_11.390
SRR6049663Rhizomagastrodiae_C368-T01_good_11.590
SRR6049664Rhizomagastrodiae_C368-T10_good_13.100
SRR6049665Rhizomagastrodiae_C368-T10_good_13.100
SRP279888GastroGastrodia elata tuber 0.43
JuvenJuvenile tuber0.03
Mother_GastroMother tuber of Gastrodia elata 0.12
Mother_JuvenMother tuber of Juvenile 0.07