Detail information of GWHGAAEX014482/evm.TU.scaffold_59.266


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186686329|ref|YP_001869525.1|06-phosphogluconate dehydrogenase [Nostoc punctiforme PCC 73102]
KOGKOG265306-phosphogluconate dehydrogenase
nrgi|743826793|ref|XP_010933404.1|0PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 1-like [Elaeis guineensis]
Swissprottr|Q9LI00|6PGD1_ORYSJ06-phosphogluconate dehydrogenase, decarboxylating 1
trEMBLtr|A0A067G3F9|A0A067G3F9_CITSI06-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}
TAIRAT3G0236006-phosphogluconate dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006850720875086562-
Transcript Sequence

Network for GWHGAAEX014482

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03446.14NAD_binding_251776.50E-47
PF00393.186PGD1824751.20E-124
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00033PGD, gnd, gntZ Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Pentose phosphate pathwaymap00030
Glutathione metabolismmap00480

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006098Biological Processpentose-phosphate shunt
GO:0050661Molecular FunctionNADP binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0004616Molecular Functionphosphogluconate dehydrogenase (decarboxylating) activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms192.750
SRR2545915Juvenile tuber343.860
SRP108465SRR5643513five period of Gastrodia elata338.730
SRR5643514five period of Gastrodia elata390.700
SRR5643515five period of Gastrodia elata379.220
SRR5643524five period of Gastrodia elata409.570
SRR5643525five period of Gastrodia elata333.110
SRR5643528five period of Gastrodia elata512.780
SRR5643658five period of Gastrodia elata356.440
SRR5643659five period of Gastrodia elata360.960
SRR5643660five period of Gastrodia elata304.820
SRR5643661five period of Gastrodia elata377.120
SRR5643662five period of Gastrodia elata285.830
SRR5643663five period of Gastrodia elata343.560
SRR5643664five period of Gastrodia elata293.820
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1460.820
SRR6049655Rhizomagastrodiae_C368-T10_good_1400.610
SRR6049656Rhizomagastrodiae_C368-T07_good_1442.870
SRR6049657Rhizomagastrodiae_C368-T07_good_1374.850
SRR6049658Rhizomagastrodiae_C368-T04_good_1376.970
SRR6049659Rhizomagastrodiae_C368-T04_good_1370.890
SRR6049660Rhizomagastrodiae_C368-T01_good_1321.710
SRR6049661Rhizomagastrodiae_C368-T04_good_1366.430
SRR6049662Rhizomagastrodiae_C368-T01_good_1478.860
SRR6049663Rhizomagastrodiae_C368-T01_good_1402.930
SRR6049664Rhizomagastrodiae_C368-T10_good_1469.710
SRR6049665Rhizomagastrodiae_C368-T10_good_1469.710
SRP279888GastroGastrodia elata tuber 301.89
JuvenJuvenile tuber251.75
Mother_GastroMother tuber of Gastrodia elata 229.44
Mother_JuvenMother tuber of Juvenile 335.25