Detail information of GWHGAAEX014489/evm.TU.scaffold_59.276


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743864339|ref|XP_010904555.1|1.03E-85PREDICTED: protein PAIR1-like [Elaeis guineensis]
Swissprottr|Q75RY2|PAIR1_ORYSJ9.00E-36Protein PAIR1
trEMBLtr|A0A067JXJ9|A0A067JXJ9_JATCU2.00E-72Uncharacterized protein {ECO:0000313|EMBL:KDP28622.1}
TAIRAT1G016908.00E-41putative recombination initiation defects 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006853553355369336+
Transcript Sequence

Network for GWHGAAEX014489

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.080
SRR2545915Juvenile tuber1.220
SRP108465SRR5643513five period of Gastrodia elata2.200
SRR5643514five period of Gastrodia elata3.330
SRR5643515five period of Gastrodia elata2.660
SRR5643524five period of Gastrodia elata3.300
SRR5643525five period of Gastrodia elata1.210
SRR5643528five period of Gastrodia elata1.260
SRR5643658five period of Gastrodia elata1.530
SRR5643659five period of Gastrodia elata0.870
SRR5643660five period of Gastrodia elata0.260
SRR5643661five period of Gastrodia elata0.650
SRR5643662five period of Gastrodia elata0.420
SRR5643663five period of Gastrodia elata0.690
SRR5643664five period of Gastrodia elata0.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.490
SRR6049655Rhizomagastrodiae_C368-T10_good_13.310
SRR6049656Rhizomagastrodiae_C368-T07_good_12.000
SRR6049657Rhizomagastrodiae_C368-T07_good_11.510
SRR6049658Rhizomagastrodiae_C368-T04_good_12.050
SRR6049659Rhizomagastrodiae_C368-T04_good_10.830
SRR6049660Rhizomagastrodiae_C368-T01_good_12.130
SRR6049661Rhizomagastrodiae_C368-T04_good_12.250
SRR6049662Rhizomagastrodiae_C368-T01_good_13.810
SRR6049663Rhizomagastrodiae_C368-T01_good_12.330
SRR6049664Rhizomagastrodiae_C368-T10_good_14.150
SRR6049665Rhizomagastrodiae_C368-T10_good_14.150
SRP279888GastroGastrodia elata tuber 0.38
JuvenJuvenile tuber0.77
Mother_GastroMother tuber of Gastrodia elata 0.49
Mother_JuvenMother tuber of Juvenile 0.26