Gene detail

Detail information of GWHGAAEX014493/evm.TU.scaffold_59.280

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2662	1.00E-137	Magnesium transporters: CorA family
nr	gi\|695021085\|ref\|XP_009397619.1\|	6.61E-161	PREDICTED: putative magnesium transporter MRS2-G [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q93ZD7\|MRS24_ARATH	5.00E-142	Magnesium transporter MRS2-4
trEMBL	tr\|I1K496\|I1K496_SOYBN	1.00E-153	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G30180.1}
TAIR	AT3G58970	1.00E-137	magnesium transporter 6

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000068	5397788	5427062	+

Transcript Sequence
>GWHTAAEX014493 CGCCGTGGCAATTATAATCTCAATTCTCAAAAAAGAAAAGCATACCAAAAGCGACTCCAGCTCTTTCTGGTTCCATCGGCAACCCGCGAGCGCGCGCGAATCGATGTGGAAGAGGAAGAGGAAGAGGAGAAGAACTCCCCCGTCTCTTTTCGACCTTCTGTCTTTTTGTCTTAGAGATTCTCTCTTTATATTCTCTCTTAGGGTCAGTTCTTTCTCCATGGACGGACAAGAAAAATGGTAAAACGAAATGGGAAAAGAAAGCTCGCTTCATTTTTCTGCAGAAAGTTCACATCATCACGGCAATCCAACCTTCAGTCTGCAATCGTCCCGACAGCGCTTCCCCTACTGTTAGAGACGCCGACGGTATCCAAAGGATGCAAGAGAAAGGCGAGTTCCCGCCTTTGGCTGATTTTCGATCGATCGGGGAAATCCGAGCTGATTGAACTCGACAAGAGCGCCATTATGCGGAGAACATCCATCCCAGCTCGTGACCTACGGATTCTCGGACCCTTATTCGCTCATTCCTCTCGTATTATTGTCAGGGAAAAGGCTATGATTATTAATTTAGAGTTTATAAAAGCCATAATTACTGCTGATGAAGTGCTGGTGTTGGATCCCTTGAGTAACAAAACTCTCCTTTTTGTGGATCAACTCAAACGACAATTTTGCCTTAAATCTCTGTCTAAGATATATGAGTCTGGCCATGTGGAAAAGTCTAGACAAAAAAATCCGTTAAATGTGGAACAAGGGTTTCTCTACGTGAATGATGAAGTTGAACGAGTGCTCCCATTTGAGTTTCAGTTCCTGGAGGCTGCGTTGGAATTTTTGTGCACCTATTTAGACTCTAGTGTTTCTGTTTTGGCAAGAACTGCATATGTCGCTCTGGATGAGCTGGTCATGGAAGTTAGCATCAAAAATCTGGAGCACGTTCGGAGCATTAAAAGCAGCATCACATGCCTGCTTTCTCGTGTTCAAAAGGTTAGGGATGAATTAGAACATCTCTTAGATGACAATGAAGATTTGATGCGGTTTTACTTGACAAGGAAGCAAATTCAAATTCAGCAATTTGAAGCATTATTTACTTCCGCAACTTCAAACATTATGGTTCTTCCTCTAAACCATGCAAAATGTGGCAATTTAGGTTTTGTTAGTCTTAATTCAGATGATAACTATGTGGAGGATTTGGAAATTTTGCTAGAGGCTTGGTTCATGCAATTGGAGAGAACCCGTGCTAAAATTCTGTCGGTGAGGGAATACATTGATTACACCGAAGACTACGTGAATATTCAACTAGACAATCAAAGGAATGAACTGATTCAATTTCAGCTTGTTTTGACTATCTTTTCCTTTGCGATGGCAATAGAATCAATGATTGCCGGGTTACTTGGTATGAACATGCCCTGCTCTCTTTTCTACATTGACAACTTATTTACCCCATTTGTTATTGCAATGACAGTTTTCTGTCTTCTCATCTTCATTCTTTTACTTGCATATGCTAGATGGAAAAAGCTGCTTGGTTCCTAAAGGGCCTTGCTTATAGCAAAGCTTTGTCCACATGTCATCTTCTTTTTCTTCTTTTTTATTAGCTATGGCTCTAGGTAGGGGTGTAAAGCGCGTAAGGGCCTTGCTCATACCAAAGCTTTGTCCACATGTCATCTTTTTTTCCTTGTTTTTTTTTAGCTTTGGCTCTAGGTAAGGGCCTTGCTGAATGTATTGTTCATGTCAAAAAATCTATGTTTTATTTGTTTTTGTAACTATTTTTACTTATTTGTTCATGTTCTGTATGATTTTGATAGAAATGTTGATGTGTTTTCAATGCTTGCATTGGAAATGTTCTATCTCATAGTTGTTAGCAATAAAAATAGTATAACTAAACTAATTAATTTTATAGTATAATTTGCAAATTGAGTTCATTCAATATAGTACAACTATTCTAAATAAATACATATCAATAATCTACAAATTGAATTCACGCAATACTTGTAGTTTAGGACAAAGAACTATTACGGGAGTTTATTGTCCGCTC

Network for GWHGAAEX014493

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.710
SRP064423	SRR2545915	Juvenile tuber	7.650
SRP108465	SRR5643513	five period of Gastrodia elata	9.860
	SRR5643514	five period of Gastrodia elata	22.620
	SRR5643515	five period of Gastrodia elata	16.800
	SRR5643524	five period of Gastrodia elata	16.640
	SRR5643525	five period of Gastrodia elata	3.090
	SRR5643528	five period of Gastrodia elata	5.600
	SRR5643658	five period of Gastrodia elata	3.480
	SRR5643659	five period of Gastrodia elata	4.860
	SRR5643660	five period of Gastrodia elata	9.090
	SRR5643661	five period of Gastrodia elata	6.660
	SRR5643662	five period of Gastrodia elata	8.180
	SRR5643663	five period of Gastrodia elata	5.560
	SRR5643664	five period of Gastrodia elata	6.290
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	23.700
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	21.940
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	18.930
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.620
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	16.190
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.700
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.920
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.540
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.290
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	13.160
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	31.830
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	31.830
SRP279888	Gastro	Gastrodia elata tuber	12.59
	Juven	Juvenile tuber	4.79
	Mother_Gastro	Mother tuber of Gastrodia elata	7.61
	Mother_Juven	Mother tuber of Juvenile	7.96