Detail information of GWHGAAEX014514/evm.TU.scaffold_6.24
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|32476268|ref|NP_869262.1| | 8.00E-32 | serine/threonine-protein kinase pknH [Rhodopirellula baltica SH 1] |
| KOG | KOG0192 | 0 | Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs |
| nr | gi|743814029|ref|XP_010929905.1| | 0 | PREDICTED: serine/threonine-protein kinase HT1-like [Elaeis guineensis] |
| Swissprot | tr|Q2MHE4|HT1_ARATH | 1.00E-69 | Serine/threonine-protein kinase HT1 |
| trEMBL | tr|D7TWH5|D7TWH5_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI34850.3} |
| TAIR | AT5G40540 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000003 | 1417925 | 1426798 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014514
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 30 | 286 | 1.70E-57 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | TKL-Pl-4 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 100.400 |
| SRR2545915 | Juvenile tuber | 101.470 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 155.070 |
| SRR5643514 | five period of Gastrodia elata | 62.930 | |
| SRR5643515 | five period of Gastrodia elata | 439.890 | |
| SRR5643524 | five period of Gastrodia elata | 106.560 | |
| SRR5643525 | five period of Gastrodia elata | 274.450 | |
| SRR5643528 | five period of Gastrodia elata | 234.700 | |
| SRR5643658 | five period of Gastrodia elata | 90.740 | |
| SRR5643659 | five period of Gastrodia elata | 364.560 | |
| SRR5643660 | five period of Gastrodia elata | 237.090 | |
| SRR5643661 | five period of Gastrodia elata | 386.170 | |
| SRR5643662 | five period of Gastrodia elata | 540.980 | |
| SRR5643663 | five period of Gastrodia elata | 392.160 | |
| SRR5643664 | five period of Gastrodia elata | 521.480 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 122.070 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 40.830 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 87.650 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 85.180 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 43.060 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 38.270 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 135.570 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 53.060 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 98.890 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 124.670 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 72.210 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 72.210 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 87.54 |
| Juven | Juvenile tuber | 85.33 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 80.02 | |
| Mother_Juven | Mother tuber of Juvenile | 71.41 |